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sw_11_scaffold_1410

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1410_1
Solanum tuberosum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

2..1060
DNA (1059bp) protein (353aa)
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400076226}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyl
sw_11_scaffold_1410_2
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1335..2105
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003610544
Uncharacterized protein {ECO:0000313|EMBL:AKB24933.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
RimK domain-containing protein ATP-grasp
sw_11_scaffold_1410_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2273..2578)
DNA (306bp) protein (102aa)
hypothetical protein id=24613719 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89773.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_11_scaffold_1410_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2581..2805)
DNA (225bp) protein (75aa)
NADH dehydrogenase-like complex subunit CD n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR96_NATP1
NADH:ubiquinone oxidoreductase 49 kD subunit 7
NADH dehydrogenase-like complex subunit CD {ECO:0000313|EMBL:ELY69598.1}; NADH:ubiquinone oxidoreductase 49 kD subunit 7 {ECO:0000313|EMBL:AGB34045.1}; TaxID=797303 species="Archaea; Euryarchaeota; Ha
sw_11_scaffold_1410_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2802..4070)
DNA (1269bp) protein (423aa)
NADH:ubiquinone oxidoreductase 49 kD subunit 7 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J2Z8_9EURY
NADH:ubiquinone oxidoreductase 49 kD subunit 7 {ECO:0000313|EMBL:ESP89772.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
NADH:ubiquinone oxidoreductase 49 kD subunit 7
sw_11_scaffold_1410_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4163..4840
DNA (678bp) protein (226aa)
Transcription regulator n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMB2_HALJP
Transcription regulator {ECO:0000313|EMBL:EMA33589.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
transcription regulator
sw_11_scaffold_1410_7
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4904..5719
DNA (816bp) protein (272aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZI42_9EURY
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:ELY86165.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwane
glycosyl hydrolase
sw_11_scaffold_1410_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5762..6490
DNA (729bp) protein (243aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV51_9EURY
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:EMA49476.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
glycosyl hydrolase
sw_11_scaffold_1410_9
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6833..7009
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C556_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ17457.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_11_scaffold_1410_10
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7055..7777)
DNA (723bp) protein (241aa)
Transposase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3H5_9EURY
Transposase {ECO:0000313|EMBL:ELY79733.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
transposase
sw_11_scaffold_1410_11
unknown

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8647..8772
DNA (126bp) protein (42aa)

This feature has no annotations

sw_11_scaffold_1410_12

Not on your lists

8918..9349
DNA (432bp) protein (144aa)
UspA domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MN62_9ARCH
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN06991.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_1410_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9619..10563
DNA (945bp) protein (315aa)
hypothetical protein id=24647569 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08705.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_1410_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10580..12049)
DNA (1470bp) protein (490aa)
yjlD4; NADH dehydrogenase (EC:1.6.99.3)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGI5_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELZ22366.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
sw_11_scaffold_1410_15
unknown

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comp(12097..12186)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_11_scaffold_1410_16
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12183..12734)
DNA (552bp) protein (184aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BPL7_NATSJ
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFO58627.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-
sw_11_scaffold_1410_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12981..13790
DNA (810bp) protein (270aa)
DisA-N domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INW4_NATPD
hypothetical protein
DisA-N domain protein {ECO:0000313|EMBL:CAI50188.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_11_scaffold_1410_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13793..14578
DNA (786bp) protein (262aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INW3_NATPD
msc_6; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI50189.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_11_scaffold_1410_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14738..15172
DNA (435bp) protein (145aa)
CBS domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INP6_NATPD
cbs_6; CBS domain-containing protein
CBS domain protein {ECO:0000313|EMBL:CAI50256.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_1410_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15229..15846
DNA (618bp) protein (206aa)
acd_6; acyl-CoA dehydrogenase 6 (EC:1.3.99.3)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CAI49593.1}; EC=1.3.8.- {ECO:0000313|EMBL:CAI49593.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
Acyl-CoA dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQK2_NATPD
Displaying 20 items

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