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sw_11_scaffold_1816

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1816_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..310
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IME4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50714.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1816_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(307..1017)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISZ2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48743.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1816_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1014..2477)
DNA (1464bp) protein (488aa)
rad3b; DNA repair helicase Rad3 (EC:3.6.4.12)
DNA repair helicase Rad3 {ECO:0000313|EMBL:CCQ37987.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CCQ37987.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
DNA repair helicase Rad3 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTW6_NATM8
sw_11_scaffold_1816_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2486..3013)
DNA (528bp) protein (176aa)
DNA repair helicase Rad3 {ECO:0000313|EMBL:CAI48744.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CAI48744.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
DNA repair helicase Rad3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISZ1_NATPD
rad3b; DNA repair helicase-like protein
sw_11_scaffold_1816_5
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3066..3770)
DNA (705bp) protein (235aa)
Putative sensor protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) PF1_HALTV">RepID=D2RPF1_HALTV
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AHF99119.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_11_scaffold_1816_6
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3767..4141)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWX5_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58966.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_11_scaffold_1816_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4266..4397)
DNA (132bp) protein (44aa)
Preprotein translocase subunit SecG n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISZ0_NATPD
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=348780 species="Archaea; Euryarchae
sw_11_scaffold_1816_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4513..4779
DNA (267bp) protein (89aa)
Thioredoxin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNE9_NATM8
trxA1; thioredoxin
Thioredoxin {ECO:0000313|EMBL:CCQ35446.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain DSM 1
sw_11_scaffold_1816_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4810..6114)
DNA (1305bp) protein (435aa)
glycerol-3-phosphate dehydrogenase n=1 Tax=Halorubrum sp. T3 RepID=UPI00035FAD54
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:KKF39993.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
glpC; sn-glycerol-3-phosphate dehydrogenase subunit C
sw_11_scaffold_1816_10

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comp(6247..7122)
DNA (876bp) protein (292aa)
Glycerol 3-phosphate dehydrogenase (Quinone) subunit B {ECO:0000313|EMBL:ESS03529.1}; EC=1.1.5.3 {ECO:0000313|EMBL:ESS03529.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncult
anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Glycerol 3-phosphate dehydrogenase (Quinone) subunit B n=1 Tax=uncultured archaeon A07HR67 RepID=V4X764_9ARCH
sw_11_scaffold_1816_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7457..9181)
DNA (1725bp) protein (575aa)
Glycerol-3-phosphate dehydrogenase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UU94_HALBP
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:ELY28475.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
glycerol 3-phosphate dehydrogenase (quinone) subunit a
sw_11_scaffold_1816_12
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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9443..10900
DNA (1458bp) protein (486aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K8F7_THENN
Glycerol kinase 2
sw_11_scaffold_1816_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10903..12042
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=Halobiforma lacisalsi RepID=M0LB64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA29195.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_11_scaffold_1816_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12112..12510)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7X5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA29198.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_11_scaffold_1816_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12633..13169)
DNA (537bp) protein (179aa)
UspA domain protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L6H0_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA29197.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
UspA domain protein
sw_11_scaffold_1816_16
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13400..13603
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L9Q1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA29199.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_11_scaffold_1816_17
unknown

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14052..14198
DNA (147bp) protein (49aa)

This feature has no annotations

sw_11_scaffold_1816_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14232..14561
DNA (330bp) protein (110aa)
Cell division control protein 6-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW24_9EURY
Cell division control protein 6-like protein {ECO:0000313|EMBL:EMA48999.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
cdc6j; cell division control protein 6-like protein
Displaying 18 items

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