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sw_11_scaffold_1870

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1870_1
unknown

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comp(2..430)
DNA (429bp) protein (143aa)

This feature has no annotations

sw_11_scaffold_1870_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(474..1046)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNL4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47256.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
cupin domain-containing protein
sw_11_scaffold_1870_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1069..1530
DNA (462bp) protein (154aa)
MutT/NUDIX family protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3F6_HALMT
mutT; mutT/NUDIX family protein
MutT/NUDIX family protein {ECO:0000313|EMBL:AFK18766.1}; NUDIX hydrolase {ECO:0000313|EMBL:AHZ21865.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
sw_11_scaffold_1870_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1623..2426
DNA (804bp) protein (268aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CCQ37959.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCQ37959.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Prephenate dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTY1_NATM8
sw_11_scaffold_1870_5
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2502..3356)
DNA (855bp) protein (285aa)
Zinc/iron permease n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA27_9EURY
gufA1; GufA family transport protein (probable substrate zinc)
Zinc/iron permease {ECO:0000313|EMBL:EMA66881.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
sw_11_scaffold_1870_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3441..4199)
DNA (759bp) protein (253aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_11_scaffold_1870_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4446..5048)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48531.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1870_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5230..7305)
DNA (2076bp) protein (692aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=348780 species="Archaea;
DNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DNLJ_NATPD
ligA; NAD-dependent DNA ligase LigA
sw_11_scaffold_1870_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7360..8037)
DNA (678bp) protein (226aa)
agt_2; aminotransferase class V (Serine--pyruvate aminotransferase 2; alanine--glyoxylate aminotransferase 2) (EC:2.6.1.51 2.6.1.44)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=1 Tax=Halonotius sp. J07HN6 RepID=U1QBY2_9EURY
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:ERH02742.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonoti
sw_11_scaffold_1870_10
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8169..8378
DNA (210bp) protein (70aa)
agt_2; aminotransferase class V (Serine--pyruvate aminotransferase 2; alanine--glyoxylate aminotransferase 2) (EC:2.6.1.51 2.6.1.44)
Aspartate aminotransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KS16_HALAR
Aspartate aminotransferase {ECO:0000313|EMBL:EMA22535.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis
sw_11_scaffold_1870_11
unknown

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8562..8858
DNA (297bp) protein (99aa)

This feature has no annotations

sw_11_scaffold_1870_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8891..9952)
DNA (1062bp) protein (354aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN18_NATM8
major facilitator superfamily transporter
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CCQ35297.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_11_scaffold_1870_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10051..10752
DNA (702bp) protein (234aa)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI48537.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI48537.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ6_NATPD
hypothetical protein
sw_11_scaffold_1870_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10869..12266
DNA (1398bp) protein (466aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SMU5_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ56184.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
sw_11_scaffold_1870_15
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12656..15109
DNA (2454bp) protein (818aa)
PAS-PAC-PAC sensing histidine kinase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJA7_9EURY
PAS-PAC-PAC sensing histidine kinase {ECO:0000313|EMBL:ELZ72965.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovens
pas domain s-box
sw_11_scaffold_1870_16
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15250..15522
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LUG0_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56317.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_11_scaffold_1870_trna_1
unknown

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comp(15740..15813)
DNA (74bp)
transferRNA
sw_11_scaffold_1870_17
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15870..16169)
DNA (300bp) protein (100aa)
Maltose:maltodextrin transport system permease n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I3K9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR50894.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
xynA; TM2 domain-containing protein
sw_11_scaffold_1870_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16292..16945)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36265.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_1870_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17024..17155)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT68_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48666.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1870_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17462..17812
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ70_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36263.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_1870_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17899..19257
DNA (1359bp) protein (453aa)
Probable sulfite/nitrite reductase (Ferredoxin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKP3_NATM8
nirA2; probable sulfite/nitrite reductase (ferredoxin)
Probable sulfite/nitrite reductase (Ferredoxin) {ECO:0000313|EMBL:CCQ36262.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
Displaying 22 items

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