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sw_11_scaffold_1921

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1921_1
unknown

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1..126
DNA (126bp) protein (42aa)

This feature has no annotations

sw_11_scaffold_1921_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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148..564
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYX3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37529.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_11_scaffold_1921_3
unknown

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1003..1179
DNA (177bp) protein (59aa)

This feature has no annotations

sw_11_scaffold_1921_4
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1385..2560
DNA (1176bp) protein (392aa)
adhC; formaldehyde dehydrogenase (EC:1.1.1.1)
Formaldehyde dehydrogenase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XMC7_9EURY
Formaldehyde dehydrogenase {ECO:0000313|EMBL:ELY62895.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.
sw_11_scaffold_1921_5
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2609..2782)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY53918.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
sw_11_scaffold_1921_6

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2889..3035
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y175_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS06346.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_11_scaffold_1921_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3032..3505)
DNA (474bp) protein (158aa)
Cobalamin synthesis protein/P47K n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L769_HALJP
Cobalamin synthesis protein/P47K {ECO:0000313|EMBL:EMA27810.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonic
cobalamin synthesis protein P47K
sw_11_scaffold_1921_8
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3502..4038)
DNA (537bp) protein (179aa)
Cobalamin synthesis protein/P47K n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V641_HALMA
cobW2; cobalamin synthesis protein/P47K
Cobalamin synthesis protein/P47K {ECO:0000313|EMBL:AAV45011.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismor
sw_11_scaffold_1921_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4507..5745
DNA (1239bp) protein (413aa)
HTR-like protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HP53_9EURY
HTR-like protein {ECO:0000313|EMBL:ESP89704.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyr
HTR-like protein
sw_11_scaffold_1921_10

Not on your lists

5742..7334
DNA (1593bp) protein (531aa)
Putative DNA binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XK66_9ARCH
Putative DNA binding protein {ECO:0000313|EMBL:ESS02338.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
PAS/PAC sensor protein
sw_11_scaffold_1921_11

Not on your lists

comp(7220..7804)
DNA (585bp) protein (195aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domain protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUW5_9ARCH
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domain protein {ECO:0000313|EMBL:ESS02337.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncult
response regulator receiver protein
sw_11_scaffold_1921_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8086..8436
DNA (351bp) protein (117aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y416_NATM8
ArsR family transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CCQ37264.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
sw_11_scaffold_1921_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8532..8909)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PIM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG93502.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_11_scaffold_1921_14
unknown

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comp(9425..9955)
DNA (531bp) protein (177aa)

This feature has no annotations

sw_11_scaffold_1921_15
unknown

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10031..10870
DNA (840bp) protein (280aa)

This feature has no annotations

sw_11_scaffold_1921_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11077..11409)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y564_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37692.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_1921_17

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comp(11558..12910)
DNA (1353bp) protein (451aa)
Glutamine synthetase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGZ5_9ARCH
Glutamine synthetase {ECO:0000313|EMBL:ESS07434.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
glutamine synthetase
sw_11_scaffold_1921_18

Not on your lists

comp(13024..13731)
DNA (708bp) protein (236aa)
Zn-dependent hydrolase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYN3_9ARCH
Zn-dependent hydrolase {ECO:0000313|EMBL:ESS07433.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Zn-dependent hydrolase
sw_11_scaffold_1921_19
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13877..14536)
DNA (660bp) protein (220aa)
trkA9; Trk potassium uptake system protein; K03499 trk system potassium uptake protein TrkA id=24617797 bin=Halonotius_J07HN4 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN4
K+ transport system, NAD-binding component {ECO:0000313|EMBL:ERH01965.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius s
potassium transporter Trk
sw_11_scaffold_1921_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14727..15215)
DNA (489bp) protein (163aa)
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:CAI49595.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CAI49595.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQK0_NATPD
hypothetical protein
sw_11_scaffold_1921_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15281..15493)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQK1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49594.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1921_22
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(15957..16097)
DNA (141bp) protein (47aa)
Acyl-CoA dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W086_9EURY
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGN02925.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;
Displaying 22 items

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