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sw_11_scaffold_194

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_194_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..437
DNA (435bp) protein (145aa)
30S ribosomal protein S2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS2_NATPD
rps2P; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_11_scaffold_194_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1420..2409
DNA (990bp) protein (330aa)
mvk; mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=34
Mevalonate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQS8_NATPD
sw_11_scaffold_194_3
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2406..3134
DNA (729bp) protein (243aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1230451 species="Archaea; Euryarchaeota; H
Isopentenyl phosphate kinase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQZ1_HALAR
isopentenyl phosphate kinase
sw_11_scaffold_194_4
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(3263..3604)
DNA (342bp) protein (114aa)
acdA2; acyl-CoA dehydrogenase (EC:1.3.99.3)
ACADM; acyl-CoA dehydrogenase, C-4 to C-12 straight chain Tax=RBG_16_Planctomycetes_64_10_curated
Acyl-CoA dehydrogenase, C-terminal domain protein id=3752272 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
sw_11_scaffold_194_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3712..5217
DNA (1506bp) protein (502aa)
acs3; long-chain acyl-CoA synthetase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N793_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA52520.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
sw_11_scaffold_194_6
unknown

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comp(5240..6088)
DNA (849bp) protein (283aa)

This feature has no annotations

sw_11_scaffold_194_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6285..7094
DNA (810bp) protein (270aa)
dehydrogenase/reductase 10 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI49942.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI49942.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK8_NATPD
sw_11_scaffold_194_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7147..7926
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK9_NATPD
hypothetical protein
GIDE domain protein {ECO:0000313|EMBL:CAI49941.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_194_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8201..9541
DNA (1341bp) protein (447aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=797114 species="Archaea; Euryarchaeota; Halobac
Beta-lactamase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT69_9EURY
putative hydrolase of the metallo-beta-lactamase superfamily protein
sw_11_scaffold_194_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9538..10563
DNA (1026bp) protein (342aa)
idsA_3; trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase ) (EC:2.5.1.1 2.5.1.10 2.5.1.29)
Geranylfarnesyl diphosphate synthase; Short=GFPS;; EC=2.5.1.81;; Farnesylgeranyl diphosphate synthase; Short=FGPP synthase;; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
Geranylfarnesyl diphosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GFPS_NATPD
sw_11_scaffold_194_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10878..12593
DNA (1716bp) protein (572aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
Glutamate--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYE_NATPD
sw_11_scaffold_194_12
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12640..12969
DNA (330bp) protein (110aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P8U4_9EURY
Zinc-containing ferredoxin {ECO:0000256|PIRNR:PIRNR000068}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
ferB1; ferredoxin (3Fe-4S)(4Fe-4S)
sw_11_scaffold_194_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13098..14000
DNA (903bp) protein (301aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
electron transfer flavoprotein alpha/beta-subunit
sw_11_scaffold_194_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14001..15473
DNA (1473bp) protein (491aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF2_HALMD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACV48720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
sw_11_scaffold_194_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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15466..17118
DNA (1653bp) protein (551aa)
Flavoprotein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W843_9EURY
flavoprotein
Flavoprotein {ECO:0000313|EMBL:AGN01478.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_11_scaffold_194_16

Not on your lists

17115..18242
DNA (1128bp) protein (376aa)
Sortase related acyltransferase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP75_9ARCH
Sortase related acyltransferase {ECO:0000313|EMBL:ESS04390.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hat4; acetyl transferase
sw_11_scaffold_194_17
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(18239..18400)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZI89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY86054.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_11_scaffold_194_18
unknown

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18523..19005
DNA (483bp) protein (161aa)

This feature has no annotations

sw_11_scaffold_194_19
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(19073..19549)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZ47_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37585.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_11_scaffold_194_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(19601..20971)
DNA (1371bp) protein (457aa)
Cytochrome P450 n=1 Tax=Halogranum salarium B-1 RepID=J2Z9J5_9EURY
Cytochrome P450 {ECO:0000313|EMBL:EJN57305.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
cytochrome P450
sw_11_scaffold_194_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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21052..21726
DNA (675bp) protein (225aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3JD98_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EJN57304.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1
Bacterio-opsin activator HTH domain protein
sw_11_scaffold_194_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21760..22599)
DNA (840bp) protein (280aa)
tmcA; tRNA(Met) cytidine acetyltransferase (EC:2.3.1.193)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRJ5_NATM8
Displaying 22 items

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