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sw_11_scaffold_2007

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2007_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1511
DNA (1509bp) protein (503aa)
Replication factor C small subunit n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH3_9EURY
replication factor C small subunit
Replication factor C small subunit {ECO:0000313|EMBL:CCQ33862.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia
sw_11_scaffold_2007_2
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1769..2434
DNA (666bp) protein (222aa)
Replication factor C small subunit n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NY70_9EURY
Replication factor C small subunit {ECO:0000313|EMBL:EMA61490.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolytic
rfc; replication factor C small subunit
sw_11_scaffold_2007_3

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2626..2919
DNA (294bp) protein (98aa)
Translation initiation factor 1A n=3 Tax=Archaea RepID=U1Q9Z9_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeo
translation initiation factor aIF-1A
sw_11_scaffold_2007_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2929..3639)
DNA (711bp) protein (237aa)
Na+/H+ antiporter-like protein yhaU n=3 Tax=Halococcus hamelinensis RepID=M0LUC0_9EURY
Na+/H+ antiporter-like protein yhaU {ECO:0000313|EMBL:EMA36768.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
sodium/hydrogen exchanger
sw_11_scaffold_2007_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3992..4333)
DNA (342bp) protein (114aa)
Potassium/proton antiporter membrane subunit, cpa2 family protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D847_9EURY
Potassium/proton antiporter membrane subunit, cpa2 family protein {ECO:0000313|EMBL:ELZ30867.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometr
sodium/hydrogen exchanger
sw_11_scaffold_2007_6
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4337..4876)
DNA (540bp) protein (180aa)
TrkA-C domain-containing protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ATX7_NATA1
TrkA-C domain-containing protein {ECO:0000313|EMBL:ELZ01792.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain
TrkA-C domain-containing protein
sw_11_scaffold_2007_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5520..7298
DNA (1779bp) protein (593aa)
lfl; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3 6.2.1.-)
Acyl-CoA synthetase {ECO:0000313|EMBL:CAI50178.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAI50178.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
Acyl-CoA synthetase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX4_NATPD
sw_11_scaffold_2007_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7358..7552
DNA (195bp) protein (65aa)
XapX family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP33_NATPD
hypothetical protein
XapX family protein {ECO:0000313|EMBL:CAI50119.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_2007_9
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7549..8001)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H438_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78533.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
homolog to archaease
sw_11_scaffold_2007_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8048..8596
DNA (549bp) protein (183aa)
GNAT family acetyltransferase (EC:2.3.1.-)
GNAT family acetyltransferase {ECO:0000313|EMBL:CCQ35967.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCQ35967.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPI4_NATM8
sw_11_scaffold_2007_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8639..9820
DNA (1182bp) protein (394aa)
DNA primase small subunit PriS {ECO:0000255|HAMAP-Rule:MF_00700}; EC=2.7.7.- {ECO:0000255|HAMAP-Rule:MF_00700};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA primase small subunit PriS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PRIS_NATPD
priA; DNA primase small subunit
sw_11_scaffold_2007_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9817..10653
DNA (837bp) protein (279aa)
DNA replication factor GINS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPJ9_NATM8
ginS; DNA replication factor GINS
DNA replication factor GINS {ECO:0000313|EMBL:CCQ35969.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapens
sw_11_scaffold_2007_13
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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comp(10625..11557)
DNA (933bp) protein (311aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0XYR5_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB11807.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
hypothetical protein
sw_11_scaffold_2007_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11718..11954
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP63_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50089.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_2007_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11956..12816
DNA (861bp) protein (287aa)
AAA-type ATPase (CDC48 subfamily) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP62_NATPD
AAA-type ATPase (transitional ATPase homolog)
AAA-type ATPase (CDC48 subfamily) {ECO:0000313|EMBL:CAI50090.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
Displaying 15 items

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