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sw_11_scaffold_2053

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2053_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..405)
-----------------
DNA (405bp)
protein (135aa)
UspA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV4_NATM8
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:CCQ36573.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_11_scaffold_2053_2
unknown

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comp(468..1181)
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

sw_11_scaffold_2053_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2946..4094)
-----------------
DNA (1149bp)
protein (383aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=797114 species="Arch
hutI; imidazolonepropionase (EC:3.5.2.7)
Probable imidazolonepropionase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCA8_9EURY
sw_11_scaffold_2053_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4091..5095)
-----------------
DNA (1005bp)
protein (335aa)
Formimidoylglutamase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N948_9EURY
Formimidoylglutamase {ECO:0000313|EMBL:EMA53175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
formimidoylglutamase
sw_11_scaffold_2053_5
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5092..6822)
-----------------
DNA (1731bp)
protein (577aa)
Probable urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000313|EMBL:ELY54621.1};; Imidazo
urocanate hydratase (EC:4.2.1.49)
Probable urocanate hydratase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WZM0_9EURY
sw_11_scaffold_2053_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6908..7552
-----------------
DNA (645bp)
protein (215aa)
DNA binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3A324_9EURY
DNA binding protein {ECO:0000313|EMBL:EJN59718.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
DNA binding protein
sw_11_scaffold_2053_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7673..8062)
-----------------
DNA (390bp)
protein (130aa)
Amidohydrolase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQ18_HALBP
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ELY23555.1}; Predicted amidohydrolase {ECO:0000313|EMBL:ADQ67763.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeo
sw_11_scaffold_2053_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8454..8834)
-----------------
DNA (381bp)
protein (127aa)
Methyltransferase type 11 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P523_HALMD
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACV49418.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohatae
sw_11_scaffold_2053_9
unknown

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8939..9118
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

sw_11_scaffold_2053_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9175..10278)
-----------------
DNA (1104bp)
protein (368aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
tpc; RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal-phosphate cyclase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CH94_9EURY
sw_11_scaffold_2053_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10936..11751)
-----------------
DNA (816bp)
protein (272aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92533.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_2053_12
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12078..12482
-----------------
DNA (405bp)
protein (135aa)
ATPase P n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JS07_NATP1
copper/silver-translocating P-type ATPase
ATPase P {ECO:0000313|EMBL:ELY71831.1}; Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AGB33166.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialb
sw_11_scaffold_2053_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12727..13302)
-----------------
DNA (576bp)
protein (192aa)
Zinc/iron permease n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P878_9EURY
Zinc/iron permease {ECO:0000313|EMBL:EMA65764.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
zinc/iron permease
sw_11_scaffold_2053_14
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(13315..13533)
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein (Fragment) n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYQ8_9EURY
Zinc/iron permease {ECO:0000313|EMBL:ELY76446.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
zinc/iron permease
sw_11_scaffold_2053_15
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14214..14795)
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRG5_NATP1
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB59245.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_11_scaffold_2053_16
unknown

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14910..15194
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

sw_11_scaffold_2053_17
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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15322..15576
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PFE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68832.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
sw_11_scaffold_2053_18
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15770..15895
-----------------
DNA (126bp)
protein (42aa)
Transposase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JST1_9EURY
transposase
Transposase {ECO:0000313|EMBL:EMA13604.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
Displaying 18 items

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