ggKbase home page

sw_11_scaffold_274

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_274_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMR0_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66184.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_11_scaffold_274_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(243..1214)
DNA (972bp) protein (324aa)
Methanol dehydrogenase regulatory protein n=3 Tax=Haloarcula RepID=Q5V2T6_HALMA
moxR4; methanol dehydrogenase regulatory protein
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:AAV46166.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_11_scaffold_274_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1284..2123)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P315_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47487.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_274_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2143..2670)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JWL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA12364.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_11_scaffold_274_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2700..4049)
DNA (1350bp) protein (450aa)
von Willebrand factor A n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNW0_9EURY
von Willebrand factor A {ECO:0000313|EMBL:EMA22593.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
magnesium chelatase
sw_11_scaffold_274_6
unknown

Not on your lists

4514..4927
DNA (414bp) protein (138aa)

This feature has no annotations

sw_11_scaffold_274_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4944..6734)
DNA (1791bp) protein (597aa)
membrane protein n=1 Tax=Halomicrobium katesii RepID=UPI00035E2408
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47490.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_274_8

Not on your lists

7005..7886
DNA (882bp) protein (294aa)
Dehydrogenase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XK79_9ARCH
Dehydrogenase {ECO:0000313|EMBL:ESS02353.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
fabG; oxidoreductase
sw_11_scaffold_274_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7899..8639)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ESH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ49369.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_11_scaffold_274_10

Not on your lists

8666..10513
DNA (1848bp) protein (616aa)
PAP2 superfamily protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZRY4_9ARCH
PAP2 superfamily protein {ECO:0000313|EMBL:ESS05490.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
PAP2 superfamily protein
sw_11_scaffold_274_11
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10743..11513)
DNA (771bp) protein (257aa)
Amino acid permease-associated region n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQ45_HALLT
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:ACM57483.1}; Flags: Precursor;; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
sw_11_scaffold_274_12
unknown

Not on your lists

11701..11916
DNA (216bp) protein (72aa)

This feature has no annotations

sw_11_scaffold_274_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12228..12698
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23458.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_274_trna_2
unknown

Not on your lists

comp(12964..13039)
DNA (76bp)
transferRNA
sw_11_scaffold_274_14
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13598..14776
DNA (1179bp) protein (393aa)
Alcohol dehydrogenase, class IV n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VNC1_9EURY
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:ELY37753.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetens
alcohol dehydrogenase, class IV
sw_11_scaffold_274_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14806..15093)
DNA (288bp) protein (96aa)
Trk active potasium channel n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K6A8_9EURY
trk; trk active potasium channel
Trk active potasium channel {ECO:0000313|EMBL:EMA16746.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae A
sw_11_scaffold_274_trna_1
unknown

Not on your lists

comp(15687..15759)
DNA (73bp)
transferRNA
sw_11_scaffold_274_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15854..17200
DNA (1347bp) protein (449aa)
cca; tRNA CCA-pyrophosphorylase (EC:2.7.7.25 2.7.7.21)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD0_NATPD
sw_11_scaffold_274_17
unknown

Not on your lists

comp(17179..17382)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_11_scaffold_274_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17423..18427)
DNA (1005bp) protein (335aa)
HdaI-type histone deacetylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB2_NATM8
hda1; HdaI-type histone deacetylase
HdaI-type histone deacetylase {ECO:0000313|EMBL:CCQ35579.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_11_scaffold_274_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18424..18741)
DNA (318bp) protein (106aa)
Transcription factor CBF/NF-Y/histone domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDZ8_9EURY
Transcription factor CBF/NF-Y/histone domain-containing protein {ECO:0000313|EMBL:ELY59852.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;
hstA; histone
sw_11_scaffold_274_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18882..20141)
DNA (1260bp) protein (420aa)
Replication protein A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNR4_NATM8
rpa2; replication protein A
Replication protein A {ECO:0000313|EMBL:CCQ35577.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_11_scaffold_274_21

Not on your lists

comp(20244..20861)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MNS1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07049.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 23 items

View Taxonomy