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sw_11_scaffold_684

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_684_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..742
DNA (741bp) protein (247aa)
dsa; dihydrolipoamide S-acyltransferase (probable E2 component of branched-chain amino acid dehydrogenase) (EC:2.3.1.-)
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:CCQ35424.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCQ35424.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Dihydrolipoamide S-acyltransferase (Probable E2 component of branched-chain amino acid dehydrogenase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ49_NATM8
sw_11_scaffold_684_2
unknown

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comp(1342..1494)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_11_scaffold_684_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1742..2053
DNA (312bp) protein (104aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
sw_11_scaffold_684_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2065..2370
DNA (306bp) protein (102aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNC2_NATM8
pcn; DNA-directed DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=268739 species="Archa
sw_11_scaffold_684_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2716..3027
DNA (312bp) protein (104aa)
hypothetical protein id=24634594 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Zinc finger, C2H2 type, DNA endonuclease family protein {ECO:0000313|EMBL:ERG97397.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" sour
sw_11_scaffold_684_6
unknown

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3028..3141
DNA (114bp) protein (38aa)

This feature has no annotations

sw_11_scaffold_684_7
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3402..4511
DNA (1110bp) protein (370aa)
Transporter permease n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XU13_9EURY
Transporter permease {ECO:0000313|EMBL:ELY64896.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
ABC-type Fe3+-siderophore transport system, permease component rbh
sw_11_scaffold_684_8
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4511..5359
DNA (849bp) protein (283aa)
ABC transporter-related protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQC0_NATP1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
ABC transporter-related protein {ECO:0000313|EMBL:ELY71252.1}; ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:AGB33424.1}; TaxID=797303 species="Archaea; Eury
sw_11_scaffold_684_9
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5447..6526
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BEW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09390.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_11_scaffold_684_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6529..7449
DNA (921bp) protein (307aa)
Oxidoreductase (Homolog to thioredoxin-disulfide reductase) n=2 Tax=Halobacterium salinarum RepID=B0R7J7_HALS3
txrB3; oxidoreductase ( thioredoxin-disulfide reductase)
Thioredoxin reductase {ECO:0000313|EMBL:AAG20413.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (str
sw_11_scaffold_684_11
unknown

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7545..7775
DNA (231bp) protein (77aa)

This feature has no annotations

sw_11_scaffold_684_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7742..8200)
DNA (459bp) protein (153aa)
CHP00725 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMX6_NATM8
CHP00725 family protein
TIGR00725 family protein {ECO:0000313|EMBL:CCQ35247.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_11_scaffold_684_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8339..8500)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48453.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_684_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8569..8859)
DNA (291bp) protein (97aa)
PHP domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT1_NATPD
hypothetical protein
PHP domain protein {ECO:0000313|EMBL:CAI48452.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_684_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9600..9998)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48449.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_684_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10274..10933
DNA (660bp) protein (220aa)
ArCOG06342 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT5_NATPD
transducer protein
ArCOG06342 family protein {ECO:0000313|EMBL:CAI48448.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_11_scaffold_684_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11049..13145)
DNA (2097bp) protein (699aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y551_NATM8
sw_11_scaffold_684_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13115..13750)
DNA (636bp) protein (212aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
Alanine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYA_NATPD
Suspect SCG annotation. See neighboring gene [sw_11_scaffold_684_17].
sw_11_scaffold_684_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13929..16391
DNA (2463bp) protein (821aa)
ATP-dependent RNA helicase/nuclease Hef {ECO:0000313|EMBL:CCQ35585.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CCQ35585.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
hef; ATP-dependent RNA helicase/nuclease Hef (EC:3.6.4.13)
ATP-dependent RNA helicase/nuclease Hef n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB3_NATM8
sw_11_scaffold_684_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(16411..17127)
DNA (717bp) protein (239aa)
Oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCU0_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ32623.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
oxidoreductase
Displaying 20 items

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