ggKbase home page

sw_11_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_85_1
unknown

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_11_scaffold_85_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(234..524)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR75_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49369.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_85_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(565..939)
DNA (375bp) protein (125aa)
ArsR family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR74_NATPD
transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CAI49370.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_11_scaffold_85_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1009..1446
DNA (438bp) protein (146aa)
UspA domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT06_NATM8
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:CCQ37509.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_11_scaffold_85_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1469..2179)
DNA (711bp) protein (237aa)
Fumarylacetoacetase family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSY0_NATM8
Fumarylacetoacetase family protein {ECO:0000313|EMBL:CCQ37510.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mo
fumarylacetoacetase family protein
sw_11_scaffold_85_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2230..3444)
DNA (1215bp) protein (405aa)
PAS domain S-box id=24645005 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH09218.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
multi-sensor signal transduction histidine kinase
sw_11_scaffold_85_7
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3550..4098)
DNA (549bp) protein (183aa)
diacylglycerol kinase n=1 Tax=Streptomyces viridosporus RepID=UPI0002DFBE87
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:EFE72578.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
sw_11_scaffold_85_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4464..6047)
DNA (1584bp) protein (528aa)
MmgE/PrpD family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLD3_NATM8
MmgE/PrpD family protein
MmgE/PrpD family protein {ECO:0000313|EMBL:CCQ37511.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_11_scaffold_85_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6090..6803)
DNA (714bp) protein (238aa)
UPF0361 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR71_NATPD
hypothetical protein
UPF0361 family protein {ECO:0000313|EMBL:CAI49373.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_11_scaffold_85_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6967..7401)
DNA (435bp) protein (145aa)
RDD domain-containing protein n=2 Tax=Haloarcula RepID=M0K1L5_9EURY
RDD domain-containing protein {ECO:0000313|EMBL:EMA15322.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae
RDD domain-containing protein
sw_11_scaffold_85_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7516..8169
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000363D17F
thioredoxin
DsbA-like thioredoxin domain-containing protein {ECO:0000313|EMBL:ACV49077.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
sw_11_scaffold_85_12
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8166..8765
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1PRS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH12844.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_11_scaffold_85_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8915..9310
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50391.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_85_14
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9374..10027
DNA (654bp) protein (218aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X4V7_9EURY
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ELY56819.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococ
sw_11_scaffold_85_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10006..11757
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EY47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60167.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
sw_11_scaffold_85_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12014..13291
DNA (1278bp) protein (426aa)
LOR/SDH bifunctional protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KIC8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26447.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_85_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13288..13557)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQH5_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33489.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_11_scaffold_85_18
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13554..13943)
DNA (390bp) protein (130aa)
Stress response protein n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0ISU2_HALMT
Stress response protein {ECO:0000313|EMBL:AFK20237.2}; Universal stress protein UspA {ECO:0000313|EMBL:AHZ23607.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferac
uspA24; UspA domain-containing protein
sw_11_scaffold_85_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14075..15436
DNA (1362bp) protein (454aa)
gcvP1; glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine cleavage system protein P alpha subunit {ECO:0000313|EMBL:CAI50389.1}; EC=1.4.4.2 {ECO:0000313|EMBL:CAI50389.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Glycine dehydrogenase (Decarboxylating) (Glycine cleavage system protein P) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB4_NATPD
sw_11_scaffold_85_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15433..16863
DNA (1431bp) protein (477aa)
gcvP2; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine cleavage system protein P beta subunit {ECO:0000313|EMBL:CAI50388.1}; EC=1.4.4.2 {ECO:0000313|EMBL:CAI50388.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Glycine dehydrogenase (Decarboxylating) (Glycine cleavage system protein P) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB5_NATPD
sw_11_scaffold_85_21
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16982..17434)
DNA (453bp) protein (151aa)
Peptidase M48 Ste24p n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LUU3_9EURY
Peptidase M48 Ste24p {ECO:0000313|EMBL:EMA35860.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
peptidase M48 Ste24p
sw_11_scaffold_85_22
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17467..18063)
DNA (597bp) protein (199aa)
Peptidase M48 Ste24p n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LUU3_9EURY
Peptidase M48 Ste24p {ECO:0000313|EMBL:EMA35860.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
peptidase M48 Ste24p
sw_11_scaffold_85_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18107..18277)
DNA (171bp) protein (57aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INC1_NATPD
hypothetical protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CAI50382.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_11_scaffold_85_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18555..19703
DNA (1149bp) protein (383aa)
acaB_5; acetyl-CoA C-acyltransferase 5 (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:CAI50381.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CAI50381.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
Acetyl-CoA C-acyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INC2_NATPD
sw_11_scaffold_85_25
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19996..20538
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L4M5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28517.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
methyltransferase family protein
sw_11_scaffold_85_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20643..21548
DNA (906bp) protein (302aa)
birA; biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
HTH domain protein / biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:CCQ37367.1}; EC=6.3.4.15 {ECO:0000313|EMBL:CCQ37367.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halo
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSP1_NATM8
sw_11_scaffold_85_27
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21555..22013)
DNA (459bp) protein (153aa)
Universal stress protein uspa-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9G1_9EURY
universal stress protein uspa-like protein
Universal stress protein uspa-like protein {ECO:0000313|EMBL:AGN02633.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchae
sw_11_scaffold_85_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22066..23082)
DNA (1017bp) protein (339aa)
guaD_2; nucleoside deaminase 2 (cytosine deaminase, guanine deaminase ) (EC:3.5.4.1 3.5.4.3)
Probable nucleoside deaminase (Cytosine/guanine deaminase) {ECO:0000313|EMBL:CAI49107.1}; EC=3.5.4.- {ECO:0000313|EMBL:CAI49107.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable nucleoside deaminase (Cytosine/guanine deaminase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRY4_NATPD
sw_11_scaffold_85_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23161..24333)
DNA (1173bp) protein (391aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRY5_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI49106.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_85_30
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24617..24763
DNA (147bp) protein (49aa)
HTR-like protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGB1_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ57644.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
PAS domain S-box
Displaying items 1-30 of 38 in total

View Taxonomy