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sw_11_scaffold_879

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_879_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(205..1449)
DNA (1245bp) protein (415aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH2_NATPD
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_11_scaffold_879_2
unknown

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1532..1834
DNA (303bp) protein (101aa)

This feature has no annotations

sw_11_scaffold_879_3
unknown

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1901..2197
DNA (297bp) protein (99aa)

This feature has no annotations

sw_11_scaffold_879_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2238..2663)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z8Z9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57110.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_879_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3255..3548
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WU53_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY52736.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
sw_11_scaffold_879_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3581..5149)
DNA (1569bp) protein (523aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CAI48838.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CAI48838.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP8_NATPD
sw_11_scaffold_879_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5146..5892)
DNA (747bp) protein (249aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1210908 specie
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Halogranum salarium B-1 RepID=J3JGU8_9EURY
dihydrodipicolinate synthase
sw_11_scaffold_879_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6205..7017
DNA (813bp) protein (271aa)
HtpX-like protease {ECO:0000313|EMBL:CAI48833.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI48833.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
HtpX-like protease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISQ2_NATPD
htpX_2; htpX protein
sw_11_scaffold_879_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7329..7697)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJH4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA07850.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_11_scaffold_879_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7831..10269
DNA (2439bp) protein (813aa)
Dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase {ECO:0000313|EMBL:CCQ32497.1}; EC=2.5.1.15 {ECO:0000313|EMBL:CCQ32497.1};; EC=6
dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase (EC:2.5.1.15 6.3.2.12 6.3.2.17)
Dihydrofolate synthase / folylpoly glutamate synthase / alternative dihydrofolate reductase 2 / dihydropteroate synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH80_9EURY
sw_11_scaffold_879_11
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10648..11427
DNA (780bp) protein (260aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
PAS sensor protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HVK5_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELZ88635.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;
sw_11_scaffold_879_12
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11510..13474)
DNA (1965bp) protein (655aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X4M0_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY56655.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
AMP-dependent synthetase and ligase
sw_11_scaffold_879_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13587..14045
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LND3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33530.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_879_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14493..14993
DNA (501bp) protein (167aa)
AsnC family transcriptional regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JF71_HALVA
Lrp/AsnC family transcription regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMA06654.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula val
sw_11_scaffold_879_15
unknown

Not on your lists

15144..15467
DNA (324bp) protein (108aa)

This feature has no annotations

sw_11_scaffold_879_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15492..17690
DNA (2199bp) protein (733aa)
cat4; cationic amino acid transporter
cat4; cationic amino acid transporter id=24658217 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cationic amino acid transporter {ECO:0000313|EMBL:ABC45217.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_11_scaffold_879_17
unknown

Not on your lists

comp(17793..17930)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_11_scaffold_879_18
unknown

Not on your lists

18339..18584
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 18 items

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