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sw_11_scaffold_915

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_915_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..391)
DNA (390bp) protein (130aa)
Ribonuclease Z {ECO:0000255|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000255|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000255|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000255|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RNZ_NATPD
hypothetical protein
sw_11_scaffold_915_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(510..1439)
DNA (930bp) protein (310aa)
ilvE1; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:CCQ35397.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CCQ35397.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
Branched-chain amino acid aminotransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK76_NATM8
sw_11_scaffold_915_3
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1509..1733)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY65703.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
sw_11_scaffold_915_4

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comp(1763..1927)
DNA (165bp) protein (55aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=756883 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=halophilic archaeon DL31 RepID=G2MHC4_9ARCH
3,4-dihydroxy-2-butanone 4-phosphate synthase
sw_11_scaffold_915_5
unknown

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1940..2371
DNA (432bp) protein (144aa)

This feature has no annotations

sw_11_scaffold_915_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2327..2986)
DNA (660bp) protein (220aa)
Riboflavin kinase; Short=RFK;; EC=2.7.1.161;; CTP-dependent riboflavin kinase; CTP:riboflavin 5'-phosphotransferase; Flavokinase; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Riboflavin kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RIFK_NATPD
rib operon protein
sw_11_scaffold_915_7
unknown

Not on your lists

3171..4217
DNA (1047bp) protein (349aa)
hypothetical protein
sw_11_scaffold_915_8
unknown

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4507..4824
DNA (318bp) protein (106aa)

This feature has no annotations

sw_11_scaffold_915_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4970..6418)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28386.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_915_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6600..7472)
DNA (873bp) protein (291aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDA9_9EURY
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:KDE58813.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagn
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
sw_11_scaffold_915_11
unknown

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7514..8455
DNA (942bp) protein (314aa)

This feature has no annotations

sw_11_scaffold_915_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8623..9801
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9F1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01385.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_11_scaffold_915_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10071..11219)
DNA (1149bp) protein (383aa)
Oxidoreductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L480_HALJP
Oxidoreductase {ECO:0000313|EMBL:EMA28387.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
oxidoreductase
sw_11_scaffold_915_14
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11412..12524
DNA (1113bp) protein (371aa)
NADH-dependent dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JB81_9EURY
NADH-dependent dehydrogenase {ECO:0000313|EMBL:EMA06251.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC
NADH-dependent dehydrogenase
sw_11_scaffold_915_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12654..13421
DNA (768bp) protein (256aa)
ArcR family transcription regulator n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7D7_HALJP
ArcR family transcription regulator {ECO:0000313|EMBL:EMA28389.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
ArcR family transcriptional regulator
sw_11_scaffold_915_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13987..14784
DNA (798bp) protein (266aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB4_NATPD
hypothetical protein
HAD superfamily hydrolase {ECO:0000313|EMBL:CAI49682.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_11_scaffold_915_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14815..15540
DNA (726bp) protein (242aa)
udp_2; uridine phosphorylase 2 (EC:2.4.2.3) rbh
Uridine phosphorylase {ECO:0000313|EMBL:CAI49681.1}; EC=2.4.2.3 {ECO:0000313|EMBL:CAI49681.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Uridine phosphorylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB5_NATPD
sw_11_scaffold_915_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15562..16005)
DNA (444bp) protein (148aa)
act; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:CCQ35530.1}; EC=3.1.2.- {ECO:0000313|EMBL:CCQ35530.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Acyl-CoA thioester hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNM1_NATM8
sw_11_scaffold_915_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16058..16954)
DNA (897bp) protein (299aa)
asparaginase (EC:3.5.1.1)
Asparaginase family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD6_NATPD
Asparaginase family protein {ECO:0000313|EMBL:CAI49307.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_11_scaffold_915_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17114..18343
DNA (1230bp) protein (410aa)
icd; isocitrate dehydrogenase (NADP+) (EC:1.1.1.42)
Isocitrate dehydrogenase (NADP) {ECO:0000313|EMBL:CAI49306.1}; EC=1.1.1.42 {ECO:0000313|EMBL:CAI49306.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Isocitrate dehydrogenase (NADP+) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD7_NATPD
Displaying 20 items

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