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sw_11_scaffold_853

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_853_1
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..120
DNA (120bp) protein (40aa)
ABC transporter permease n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P8L0_9EURY
ABC transporter permease {ECO:0000313|EMBL:EMA66188.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;
sw_11_scaffold_853_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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127..2133
DNA (2007bp) protein (669aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3X2_HALJP
glycerol-3-phosphate ABC transporter ATP-binding protein
Glycerol-3-phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJF24294.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
sw_11_scaffold_853_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2181..2660
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5J8_NATM8
hypothetical protein
Deaminase domain protein {ECO:0000313|EMBL:CCQ37845.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_11_scaffold_853_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2652..3029)
DNA (378bp) protein (126aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEB2_HALJP
hypothetical protein
sw_11_scaffold_853_5
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3007..4404)
DNA (1398bp) protein (466aa)
Transposase and inactivated derivatives n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1L5_HALMA
tnp; transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:AAV46587.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula m
sw_11_scaffold_853_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4446..4589
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INS0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50232.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_853_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4707..4859)
DNA (153bp) protein (51aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEB2_HALJP
hypothetical protein
sw_11_scaffold_853_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4831..5142)
DNA (312bp) protein (104aa)
AbrB family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L7_NATM8
AbrB family transcription regulator
Probable VapB/AbrB family antitoxin {ECO:0000313|EMBL:CCQ36003.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
sw_11_scaffold_853_9
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5403..6020)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H1M5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78400.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_11_scaffold_853_10

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comp(6052..6492)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9E4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09431.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_11_scaffold_853_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6539..8227)
DNA (1689bp) protein (563aa)
Radical SAM domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKW2_NATM8
radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:CCQ36613.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensi
sw_11_scaffold_853_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8972..9124
DNA (153bp) protein (51aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y2A1_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ36610.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_11_scaffold_853_13
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9215..9667
DNA (453bp) protein (151aa)
DNA-binding CopG-like domain-containing protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PBT2_9EURY
DNA-binding CopG-like domain-containing protein {ECO:0000313|EMBL:EMA66295.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
DNA-binding CopG-like domain-containing protein domain
sw_11_scaffold_853_14
unknown

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9664..9762
DNA (99bp) protein (33aa)

This feature has no annotations

sw_11_scaffold_853_15

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9930..11021
DNA (1092bp) protein (364aa)
Extracellular ligand-binding receptor n=1 Tax=halophilic archaeon DL31 RepID=G2MNQ4_9ARCH
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEN07032.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 15 items

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