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sw_11_scaffold_3445

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3445_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..396
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28137.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
DUF302 family protein
sw_11_scaffold_3445_2
unknown

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comp(393..530)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_11_scaffold_3445_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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675..965
DNA (291bp) protein (97aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITN4_NATPD
hypothetical protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CAI48499.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_11_scaffold_3445_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1063..1500)
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=2 Tax=Halococcus RepID=M0MJL6_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
nusG; transcription antitermination protein NusG
sw_11_scaffold_3445_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1500..1673)
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SECE_NATPD
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000255|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000255|HAMAP-Rule:MF_00422}; TaxID=348780 species="Archaea; Euryarchaeot
sw_11_scaffold_3445_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1726..2895)
DNA (1170bp) protein (390aa)
Cell division protein FtsZ n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITN7_NATPD
ftsZ_1; cell division protein FtsZ rbh
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_11_scaffold_3445_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3033..4262)
DNA (1230bp) protein (410aa)
dtdA; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=268739 species="Archae
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK66_NATM8
sw_11_scaffold_3445_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4588..5535
DNA (948bp) protein (316aa)
Molybdate transport protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PG20_9EURY
Molybdate transport protein {ECO:0000313|EMBL:EMA67735.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 1
molybdate transport protein
sw_11_scaffold_3445_9

Not on your lists

5532..6155
DNA (624bp) protein (208aa)
ABC-type tungstate transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XRD6_9ARCH
ABC-type tungstate transport system, periplasmic component {ECO:0000313|EMBL:ESS04678.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC-type transport system permease protein (probable substrate sulfate/tungstate)
sw_11_scaffold_3445_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6155..6919
DNA (765bp) protein (255aa)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5E6_HALJP
Phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA28812.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
ABC transporter
sw_11_scaffold_3445_11
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7214..7552
DNA (339bp) protein (113aa)
ModE family transcriptional regulator n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDP1_9EURY
ModE family transcriptional regulator {ECO:0000313|EMBL:ELY59536.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus am
molybdenum-binding protein
sw_11_scaffold_3445_12
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8047..8427
DNA (381bp) protein (127aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1227452 species="Archaea; Eurya
Shikimate dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KQ27_9EURY
shikimate 5-dehydrogenase
sw_11_scaffold_3445_13
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8501..8959
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Natronorubrum tibetense RepID=UPI000370623F
Uncharacterized protein {ECO:0000313|EMBL:ELY37450.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
aromatic amino acid cluster protein
sw_11_scaffold_3445_14
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9765..10274)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AF503
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA50075.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
sw_11_scaffold_3445_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10291..10902
DNA (612bp) protein (204aa)
trpG_2; anthranilate synthase, component II 2 (EC:4.1.3.27)
Aminodeoxychorismate synthase component 2 {ECO:0000313|EMBL:CAI48491.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CAI48491.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Aminodeoxychorismate synthase component I n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITP2_NATPD
sw_11_scaffold_3445_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10887..11747
DNA (861bp) protein (287aa)
ilvE_2; branched-chain amino acid aminotransferase 2 (EC:2.6.1.42) rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:CAI48490.1}; EC=4.1.3.38 {ECO:0000313|EMBL:CAI48490.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
Aminodeoxychorismate lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITP3_NATPD
sw_11_scaffold_3445_17
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11754..12413)
DNA (660bp) protein (220aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BP57_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ELZ12267.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asia
Bacterio-opsin activator HTH domain-containing protein
sw_11_scaffold_3445_18
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12535..12762)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42343.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_11_scaffold_3445_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12816..13367)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Q3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01998.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying 19 items

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