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sw_11_scaffold_4925

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_4925_1
unknown

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comp(2..82)
DNA (81bp) protein (27aa)

This feature has no annotations

sw_11_scaffold_4925_2
unknown

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comp(537..686)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_11_scaffold_4925_3
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(750..1496)
DNA (747bp) protein (249aa)
Transposase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NMW2_9EURY
Transposase {ECO:0000313|EMBL:EMA59136.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
transposase
sw_11_scaffold_4925_4
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1868..2032
DNA (165bp) protein (55aa)
Uncharacterized protein (Fragment) n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LP82_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA34913.1}; Flags: Fragment;; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma ni
sw_11_scaffold_4925_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2056..3063)
DNA (1008bp) protein (336aa)
endA; tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000255|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000255|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000255|HAMAP-Rule:MF_01834}; TaxID=348780 species="Archaea;
tRNA-splicing endonuclease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ENDA_NATPD
sw_11_scaffold_4925_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3123..3569)
DNA (447bp) protein (149aa)
DNA topoisomerase I (EC:5.99.1.2)
Homolog to DNA topoisomerase I n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU69_NATPD
Homolog to DNA topoisomerase 1 {ECO:0000313|EMBL:CAI48314.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_11_scaffold_4925_7

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3923..4600
DNA (678bp) protein (226aa)
Putative DNA binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0K8_9ARCH
Putative DNA binding protein {ECO:0000313|EMBL:ESS04452.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
Bacterio-opsin activator HTH domain-containing protein
sw_11_scaffold_4925_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4730..5662
DNA (933bp) protein (311aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTI6_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN96952.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
sw_11_scaffold_4925_9
unknown

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5666..5893
DNA (228bp) protein (76aa)

This feature has no annotations

sw_11_scaffold_4925_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6068..6214)
DNA (147bp) protein (49aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMW2_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35227.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_11_scaffold_4925_11
unknown

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6559..7056
DNA (498bp) protein (166aa)

This feature has no annotations

sw_11_scaffold_4925_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7076..7360)
DNA (285bp) protein (95aa)
PurE family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK42_NATM8
purE2; PurE family protein
PurE family protein {ECO:0000313|EMBL:CCQ35226.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
Displaying 12 items

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