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sw_11_scaffold_5488

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_5488_1
unknown

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1..456
DNA (456bp) protein (152aa)

This feature has no annotations

sw_11_scaffold_5488_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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531..962
DNA (432bp) protein (144aa)
act1; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:CAJ51448.1}; EC=3.1.2.- {ECO:0000313|EMBL:CAJ51448.1};; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqu
Acyl-CoA thioester hydrolase n=2 Tax=Haloquadratum walsbyi RepID=G0LHS3_HALWC
sw_11_scaffold_5488_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1335..1883)
DNA (549bp) protein (183aa)
Transposase n=1 Tax=Natrinema gari JCM 14663 RepID=L9YSM1_9EURY
Transposase {ECO:0000313|EMBL:ELY77215.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
integrase catalytic subunit
sw_11_scaffold_5488_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1988..2389
DNA (402bp) protein (134aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX5 RepID=U1P731_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERG87926.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
transcriptional regulator, PadR family
sw_11_scaffold_5488_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2278..2874)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PEX8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08896.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_5488_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2880..3473)
DNA (594bp) protein (198aa)
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4] id=24644677 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Ribonuclease HI {ECO:0000313|EMBL:ERH08891.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ribonuclease H
sw_11_scaffold_5488_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3878..4588
DNA (711bp) protein (237aa)
Transcription initiation factor IIB n=1 Tax=halophilic archaeon J07HX64 RepID=U1QT21_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s
Transcription factor TFIIB cyclin-related
Displaying 7 items

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