ggKbase home page

sw_11_scaffold_956

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_956_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
Radical SAM domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4II19_9EURY
Radical SAM protein {ECO:0000313|EMBL:AHG03124.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Fe-S oxidoreductase
sw_11_scaffold_956_2
unknown

Not on your lists

comp(232..1233)
DNA (1002bp) protein (334aa)

This feature has no annotations

sw_11_scaffold_956_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1313..2884)
DNA (1572bp) protein (524aa)
purNH; phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.2 2.1.2.3)
Phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:CAI48922.1}; EC=2.1.2.2 {ECO:0000313|EMBL:CAI48922.1};; EC=2.1.2.3 {ECO:000031
Phosphoribosylglycinamide formyltransferase / phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISG5_NATPD
sw_11_scaffold_956_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3060..3983)
DNA (924bp) protein (308aa)
APH family phosphotransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3N9_NATM8
APH family phosphotransferase
APH family phosphotransferase {ECO:0000313|EMBL:CCQ37141.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_11_scaffold_956_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3980..4645)
DNA (666bp) protein (222aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS51_NATM8
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:CCQ37140.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_11_scaffold_956_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4872..6200
DNA (1329bp) protein (443aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISG7_NATPD
sw_11_scaffold_956_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7018..7716
DNA (699bp) protein (233aa)
GTP-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISG2_NATPD
gbp5; translation-associated GTPase
GTP-binding protein {ECO:0000313|EMBL:CAI48925.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_956_8
unknown

Not on your lists

7831..7992
DNA (162bp) protein (54aa)

This feature has no annotations

sw_11_scaffold_956_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8035..8886)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58476.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_956_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8944..9747)
DNA (804bp) protein (268aa)
aspC_2; PLP-dependent aminotransferase ( aspartate aminotransferase 2) (EC:2.6.1.1)
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) {ECO:0000313|EMBL:CAI48924.1}; EC=2.6.1.- {ECO:0000313|EMBL:CAI48924.1};; TaxID=348780 species="Archaea; Euryarchae
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISG3_NATPD
sw_11_scaffold_956_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9744..10088)
DNA (345bp) protein (115aa)
Aminotransferase class I and II n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0D4_HALMD
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACV48926.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_11_scaffold_956_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10216..10365)
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037CF279
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48923.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_956_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10487..11632
DNA (1146bp) protein (382aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
Aspartate--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYD_NATPD
sw_11_scaffold_956_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11808..12083
DNA (276bp) protein (92aa)
GTP-binding protein Era n=2 Tax=Haloquadratum walsbyi RepID=G0LFW3_HALWC
GTP-binding protein
GTP binding protein {ECO:0000313|EMBL:ERH08335.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
Displaying 14 items

View Taxonomy