ggKbase home page

sw_11_scaffold_56_25

Organism: SW_11_Halobacteriales_67_37

partial RP 16 / 55 MC: 3 BSCG 10 / 51 ASCG 11 / 38
Location: comp(19317..20783)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 487.0
  • Bit_score: 844
  • Evalue 7.60e-242
tRNA-splicing ligase RtcB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMZ0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 487.0
  • Bit_score: 844
  • Evalue 5.40e-242
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 484.0
  • Bit_score: 815
  • Evalue 9.90e-234

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1467
TGCACCATGACCACGTTCGACGCCGGCTCGGTCACACTCGAGAAGGTCCGGGACTACGTCTGGGAAATCCCCCAGTCCGGCGAGATGCGCGTCCCCGCACGCGTCCTCGCCAGCGAACGACTGCTCGAGGAAATAAAGGAAGACAAGACCCTCCAGCAACTCCGCAACACCACCCACCTCCCCGGCATCCAGGAGTACGCCGTCTGCATGCCCGACGGCCACCAGGGCTATGGCTTCCCCGTCGGTGGGGTCGCAGCTCTCGATGCCGAAAACGGCTGTATTAGCCCCGGAGCGGTCGGTTACGACGTAAATTGCGGCGTCCGAATGTTAAAAACAAATTTAAAATATAATGAAATTAAAGGCCGCGAGGCGGAACTCGTCGACACACTCTTCGCGAACATCCCCTCCGGCCTAGGCGGGGGCGGGGTCTACGAGGGGTCGATGGCCGATATCGAGGCGATCCTCGACCGGGGGATGGACTGGGCCCTGGAGGAGGGCTTTGCCGTCGAGGACGACCTGGCCCATTGCGAGGACGAGGGGCGCCGTCCCGAGGCCGACGCCGGGGCCGTCTCCCAGCAGGCCAAGGACCGTGGGAAGAATCAGGTGGGCAGTCTGGGCAGCGGGAACCACTTCCTGGAGGTCCAGCGGGTCACCGACATCTACCGCGAGAGCGTCGCCAGCGAGTTCGGCCTGCGGGAAGACCAGGTCGTGGTGCTCGTCCACTGTGGCTCGCGGGGACTGGGCCACCAGGTCTGTACGGACTACCTCCGGGAGGTCGAGCAGACCCACCAGGGGCTGTTGAACCGGCTCCCCGACAAGGAACTCGCAGCGGCGCCCGCCGGGTCACACCTCGCAGAGGAGTACTACCGGGCGATGTGTGCGGCGATCAACTTCGCGTGGGTGAACCGCCAGCTCATCACCCACCGGACTCGCCGGGTGTTCGAGCAGGTGTTCGACCGCTCCTGGGAGGAGATGGGCATGGACCTGCTGTACGACGTGGCTCACAACATCGCCAAGAAGGAGGTCCACGACGTCGGGGGGAGCGACCGGGAAGTGTTCGTCCACCGGAAGGGTGCGACGCGTGCGTTCCCGGCGGGTCACCCGCAGGTCCCGCGGGCCTACAGGGACGTCGGCCAGCCCATCATCATCCCGGGGAGCATGGGCGCGGGCAGCTACGTCCTGCGGGGCGGCGACCACTCGCTGTCGGAGACGTTCGGGTCGACCGCACACGGTGCCGGGCGCCTGATGTCGCGCACGCAGGCCAAACAGGAGTACTGGGGCGAGGACGTGATGGACGACCTGCGCGAACAGGACCACGTCTACGTCAAGGCACAGAGTGGCGCGACCGTCGCAGAGGAGGCACCCGGCGTCTACAAGGACGTCGACGAAGTCGTCCGCGTCTCGGACGCGCTGGGTATCGGCGACCGCGTGGCCCGCACGTTCCCGGTCTGCAACATCAAGGGGTAG
PROTEIN sequence
Length: 489
CTMTTFDAGSVTLEKVRDYVWEIPQSGEMRVPARVLASERLLEEIKEDKTLQQLRNTTHLPGIQEYAVCMPDGHQGYGFPVGGVAALDAENGCISPGAVGYDVNCGVRMLKTNLKYNEIKGREAELVDTLFANIPSGLGGGGVYEGSMADIEAILDRGMDWALEEGFAVEDDLAHCEDEGRRPEADAGAVSQQAKDRGKNQVGSLGSGNHFLEVQRVTDIYRESVASEFGLREDQVVVLVHCGSRGLGHQVCTDYLREVEQTHQGLLNRLPDKELAAAPAGSHLAEEYYRAMCAAINFAWVNRQLITHRTRRVFEQVFDRSWEEMGMDLLYDVAHNIAKKEVHDVGGSDREVFVHRKGATRAFPAGHPQVPRAYRDVGQPIIIPGSMGAGSYVLRGGDHSLSETFGSTAHGAGRLMSRTQAKQEYWGEDVMDDLREQDHVYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDRVARTFPVCNIKG*