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SW_11_Halobacteriales_67_37

In projects: SW_11  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: SW_11_UNK

Properties

Avg. coverage: 36.74 Longest contig: 28.54 Kbp Bin length: 868.18 Kbp GC content: 67.28 %
Contigs count: 104 Features count: 988 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 16 / 55 MC: 3 BSCG 10 / 51 ASCG 11 / 38
Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_982
Class: Halobacteria (90.32%)
31 28542 bp 66.32 34.55 88.35
sw_11_scaffold_39
Order: Halobacteriales (57.69%)
26 25948 bp 67.00 35.51 92.46
sw_11_scaffold_56
Order: Halobacteriales (76%)
25 20784 bp 67.88 35.09 91.34
sw_11_scaffold_289
Order: Halobacteriales (62.5%)
24 20692 bp 65.14 36.78 83.64
sw_11_scaffold_387
Class: Halobacteria (75%)
20 19567 bp 66.62 35.35 86.92
sw_11_scaffold_375
Order: Halobacteriales (84.21%)
19 17565 bp 69.18 39.34 85.38
sw_11_scaffold_234
Class: Halobacteria (94.44%)
18 16761 bp 67.72 36.73 92.16
sw_11_scaffold_685
Order: Halobacteriales (52.94%)
17 14743 bp 65.90 37.27 82.70
sw_11_scaffold_602
Order: Halobacteriales (50%)
16 15601 bp 66.63 36.12 90.38
sw_11_scaffold_135
Order: Halobacteriales (56.25%)
16 18074 bp 68.04 36.00 94.23
sw_11_scaffold_284
Order: Halobacteriales (81.25%)
16 17043 bp 65.09 35.61 88.59
sw_11_scaffold_1433
Order: Halobacteriales (86.67%)
15 11226 bp 67.17 43.98 88.08
sw_11_scaffold_1705
Species: Halorubrum coriense (53.33%)
15 16140 bp 65.37 33.88 92.42
sw_11_scaffold_246
Order: Halobacteriales (66.67%)
15 13620 bp 65.43 32.88 90.70
sw_11_scaffold_753
Order: Halobacteriales (93.33%)
15 12820 bp 66.54 37.40 93.98
sw_11_scaffold_3979
Order: Halobacteriales (71.43%)
14 12084 bp 65.09 30.97 72.67
sw_11_scaffold_377
Class: Halobacteria (85.71%)
14 9684 bp 68.88 39.26 91.02
sw_11_scaffold_423
Order: Halobacteriales (64.29%)
14 10587 bp 68.22 37.73 91.78
sw_11_scaffold_748
Order: Halobacteriales (78.57%)
14 19774 bp 66.28 36.39 89.18
sw_11_scaffold_1239
Order: Halobacteriales (78.57%)
14 8887 bp 67.11 40.13 87.61
sw_11_scaffold_2714
Class: Halobacteria (71.43%)
14 9504 bp 64.85 36.01 69.51
sw_11_scaffold_3637
Order: Halobacteriales (69.23%)
13 7502 bp 65.01 34.98 82.86
sw_11_scaffold_941
Order: Halobacteriales (92.31%)
13 8916 bp 69.04 40.85 93.10
sw_11_scaffold_461
Order: Halobacteriales (84.62%)
13 10040 bp 69.06 38.36 87.07
sw_11_scaffold_231
Class: Halobacteria (76.92%)
13 16374 bp 66.79 42.27 87.28
sw_11_scaffold_483
Order: Halobacteriales (66.67%)
12 8508 bp 66.38 39.06 91.22
sw_11_scaffold_1783
Order: Haloferacales (50%)
12 8757 bp 66.12 34.95 78.11
sw_11_scaffold_280
Order: Halobacteriales (58.33%)
12 11128 bp 69.12 39.74 87.67
sw_11_scaffold_1123
Class: Halobacteria (75%)
12 8610 bp 67.11 34.16 79.79
sw_11_scaffold_621
Order: Halobacteriales (90.91%)
11 9860 bp 68.52 37.15 94.29
sw_11_scaffold_464
Order: Halobacteriales (54.55%)
11 9362 bp 67.08 40.58 93.89
sw_11_scaffold_949
Order: Halobacteriales (72.73%)
11 11325 bp 67.78 36.06 89.46
sw_11_scaffold_1255
Order: Halobacteriales (72.73%)
11 10574 bp 67.94 35.97 89.34
sw_11_scaffold_401
Class: Halobacteria (72.73%)
11 12883 bp 66.57 38.09 93.29
sw_11_scaffold_2475
Species: Haloarcula vallismortis (50%)
10 7781 bp 68.81 39.54 95.89
sw_11_scaffold_4139
Species: Halosimplex carlsbadense (50%)
10 5698 bp 67.04 31.64 92.35
sw_11_scaffold_1617
Order: Halobacteriales (70%)
10 6579 bp 67.26 34.43 95.49
sw_11_scaffold_1227
Order: Halobacteriales (80%)
10 9266 bp 65.80 36.09 93.96
sw_11_scaffold_651
Order: Halobacteriales (80%)
10 10645 bp 68.49 36.77 95.43
sw_11_scaffold_975
Order: Halobacteriales (90%)
10 7118 bp 67.45 40.37 91.51
sw_11_scaffold_772
Order: Halobacteriales (70%)
10 8149 bp 67.03 36.49 93.88
sw_11_scaffold_381
Order: Halobacteriales (70%)
10 10858 bp 69.61 40.97 83.52
sw_11_scaffold_752
Order: Halobacteriales (60%)
10 6938 bp 68.69 44.78 92.29
sw_11_scaffold_2117
Class: Halobacteria (60%)
10 8389 bp 65.63 33.69 90.08
sw_11_scaffold_1339
Order: Halobacteriales (66.67%)
9 10984 bp 67.95 35.88 93.85
sw_11_scaffold_1486
Order: Halobacteriales (88.89%)
9 10581 bp 67.35 43.12 93.31
sw_11_scaffold_1651
Order: Halobacteriales (88.89%)
9 8590 bp 68.80 34.05 92.27
sw_11_scaffold_1494
Order: Halobacteriales (77.78%)
9 7635 bp 65.27 33.03 87.47
sw_11_scaffold_479
Order: Haloferacales (62.5%)
8 8546 bp 68.02 37.77 95.69
sw_11_scaffold_1522
Order: Halobacteriales (62.5%)
8 4926 bp 66.61 40.01 93.91
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.