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sw_11_scaffold_3979

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3979_1
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(168..392)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V5T4_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45118.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_11_scaffold_3979_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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682..1677
DNA (996bp) protein (332aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CXR6_9EURY
Ornithine cyclodeaminase {ECO:0000313|EMBL:ELZ27428.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
sw_11_scaffold_3979_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2123..2971
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89549.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_11_scaffold_3979_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3104..3781)
DNA (678bp) protein (226aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-R
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D603_9EURY
sw_11_scaffold_3979_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4655..5341
DNA (687bp) protein (229aa)
Haloacid dehalogenase, type II n=1 Tax=Halobacterium sp. DL1 RepID=G4IH05_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:AHG02856.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
haloacid dehalogenase, type II
sw_11_scaffold_3979_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6048..6608
DNA (561bp) protein (187aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLJ0_HALAR
trzA3; N-ethylammeline chlorohydrolase
sw_11_scaffold_3979_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6664..7941
DNA (1278bp) protein (426aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Halomicrobium katesii RepID=UPI00036A30BF
sw_11_scaffold_3979_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8022..8606
DNA (585bp) protein (195aa)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W3L4_9EURY
geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AGN00602.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp
sw_11_scaffold_3979_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8668..8931
DNA (264bp) protein (88aa)
idsA_1; multifunctional short/long-chain (E)-prenyl diphosphate synthase (EC:2.5.1.-); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=24653674 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:ERG88077.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
geranylgeranyl pyrophosphate synthase
sw_11_scaffold_3979_10
unknown

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9216..9623
DNA (408bp) protein (136aa)

This feature has no annotations

sw_11_scaffold_3979_11
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9655..10029
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003782472
Uncharacterized protein {ECO:0000313|EMBL:ERH13379.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_11_scaffold_3979_12
unknown

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10087..10317
DNA (231bp) protein (77aa)

This feature has no annotations

sw_11_scaffold_3979_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10393..11931
DNA (1539bp) protein (513aa)
(R)-citramalate synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JG70_HALVA
(R)-citramalate synthase {ECO:0000313|EMBL:EMA06685.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATC
citramalate synthase
sw_11_scaffold_3979_14
unknown

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11980..12084
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 14 items

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