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SW_11_Halobacteriales_67_37

In projects: SW_11  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: SW_11_UNK

Properties

Avg. coverage: 36.74 Longest contig: 28.54 Kbp Bin length: 868.18 Kbp GC content: 67.28 %
Contigs count: 104 Features count: 988 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 16 / 55 MC: 3 BSCG 10 / 51 ASCG 11 / 38
Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_11_scaffold_752
Order: Halobacteriales (60%)
10 6938 bp 68.69 44.78 92.29
sw_11_scaffold_1433
Order: Halobacteriales (86.67%)
15 11226 bp 67.17 43.98 88.08
sw_11_scaffold_2316
Order: Halobacteriales (60%)
5 6072 bp 71.08 43.28 100.10
sw_11_scaffold_1486
Order: Halobacteriales (88.89%)
9 10581 bp 67.35 43.12 93.31
sw_11_scaffold_1490
Order: Natrialbales (50%)
6 4983 bp 70.44 42.64 90.49
sw_11_scaffold_1445
Order: Halobacteriales (100%)
5 5094 bp 69.30 42.46 82.10
sw_11_scaffold_231
Class: Halobacteria (76.92%)
13 16374 bp 66.79 42.27 87.28
sw_11_scaffold_558
Order: Halobacteriales (85.71%)
7 8813 bp 67.57 41.64 78.74
sw_11_scaffold_381
Order: Halobacteriales (70%)
10 10858 bp 69.61 40.97 83.52
sw_11_scaffold_941
Order: Halobacteriales (92.31%)
13 8916 bp 69.04 40.85 93.10
sw_11_scaffold_6589
Species: Halorubrum lacusprofundi (50%)
2 3153 bp 69.30 40.79 100.29
sw_11_scaffold_3227
Class: Halobacteria (66.67%)
6 5393 bp 70.39 40.66 75.54
sw_11_scaffold_464
Order: Halobacteriales (54.55%)
11 9362 bp 67.08 40.58 93.89
sw_11_scaffold_1509
Order: Halobacteriales (50%)
8 4951 bp 69.38 40.44 89.92
sw_11_scaffold_975
Order: Halobacteriales (90%)
10 7118 bp 67.45 40.37 91.51
sw_11_scaffold_2005
Genus: Haloarcula (50%)
4 4206 bp 69.71 40.18 92.94
sw_11_scaffold_1239
Order: Halobacteriales (78.57%)
14 8887 bp 67.11 40.13 87.61
sw_11_scaffold_1522
Order: Halobacteriales (62.5%)
8 4926 bp 66.61 40.01 93.91
sw_11_scaffold_7593
Genus: Haloarcula (50%)
4 3089 bp 67.76 39.92 97.22
sw_11_scaffold_6555
Order: Halobacteriales (66.67%)
3 3638 bp 70.75 39.75 87.99
sw_11_scaffold_280
Order: Halobacteriales (58.33%)
12 11128 bp 69.12 39.74 87.67
sw_11_scaffold_2808
Order: Halobacteriales (100%)
6 3962 bp 64.71 39.65 82.23
sw_11_scaffold_2475
Species: Haloarcula vallismortis (50%)
10 7781 bp 68.81 39.54 95.89
sw_11_scaffold_375
Order: Halobacteriales (84.21%)
19 17565 bp 69.18 39.34 85.38
sw_11_scaffold_377
Class: Halobacteria (85.71%)
14 9684 bp 68.88 39.26 91.02
sw_11_scaffold_2721
Order: Halobacteriales (62.5%)
8 4741 bp 69.08 39.11 99.92
sw_11_scaffold_483
Order: Halobacteriales (66.67%)
12 8508 bp 66.38 39.06 91.22
sw_11_scaffold_2606
Order: Halobacteriales (85.71%)
7 4804 bp 68.09 38.95 93.86
sw_11_scaffold_6882
Order: Halobacteriales (66.67%)
6 3177 bp 65.09 38.94 81.49
sw_11_scaffold_7091
Species: Halosimplex carlsbadense (50%)
4 3107 bp 71.03 38.88 71.26
sw_11_scaffold_2173
Genus: Haloarcula (60%)
5 3990 bp 71.03 38.62 94.96
sw_11_scaffold_461
Order: Halobacteriales (84.62%)
13 10040 bp 69.06 38.36 87.07
sw_11_scaffold_3046
Order: Halobacteriales (71.43%)
7 5150 bp 66.00 38.21 76.89
sw_11_scaffold_1875
Order: Halobacteriales (100%)
5 4350 bp 66.28 38.16 93.10
sw_11_scaffold_401
Class: Halobacteria (72.73%)
11 12883 bp 66.57 38.09 93.29
sw_11_scaffold_479
Order: Haloferacales (62.5%)
8 8546 bp 68.02 37.77 95.69
sw_11_scaffold_1234
Order: Halobacteriales (60%)
5 5521 bp 69.82 37.76 97.70
sw_11_scaffold_423
Order: Halobacteriales (64.29%)
14 10587 bp 68.22 37.73 91.78
sw_11_scaffold_3105
Genus: Halorubrum (50%)
4 3167 bp 65.90 37.57 92.17
sw_11_scaffold_4184
Genus: Haloarcula (50%)
6 5537 bp 69.32 37.48 94.00
sw_11_scaffold_753
Order: Halobacteriales (93.33%)
15 12820 bp 66.54 37.40 93.98
sw_11_scaffold_685
Order: Halobacteriales (52.94%)
17 14743 bp 65.90 37.27 82.70
sw_11_scaffold_604
Order: Halobacteriales (60%)
5 10391 bp 66.56 37.23 92.76
sw_11_scaffold_621
Order: Halobacteriales (90.91%)
11 9860 bp 68.52 37.15 94.29
sw_11_scaffold_2273
Order: Halobacteriales (66.67%)
3 3884 bp 68.95 36.89 97.79
sw_11_scaffold_1183
Order: Halobacteriales (87.5%)
8 7155 bp 68.50 36.85 94.84
sw_11_scaffold_289
Order: Halobacteriales (62.5%)
24 20692 bp 65.14 36.78 83.64
sw_11_scaffold_651
Order: Halobacteriales (80%)
10 10645 bp 68.49 36.77 95.43
sw_11_scaffold_234
Class: Halobacteria (94.44%)
18 16761 bp 67.72 36.73 92.16
sw_11_scaffold_2140
Order: Natrialbales (50%)
6 4577 bp 65.55 36.54 89.53
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.