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sw_11_scaffold_1239

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1239_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10..537)
DNA (528bp) protein (176aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW67_HALMD
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACV48196.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
sw_11_scaffold_1239_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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654..935
DNA (282bp) protein (94aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=24646602 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44e
sw_11_scaffold_1239_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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938..1111
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPB9_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
30S ribosomal protein S27E
sw_11_scaffold_1239_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1108..1971
DNA (864bp) protein (288aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWG7_HALVA
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=662477 species="Arch
translation initiation factor IF-2
sw_11_scaffold_1239_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1997..2179
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NS27_HALBP
zn-ribbon RNA-binding protein
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometric
sw_11_scaffold_1239_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2185..2937
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA20937.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
3-isopropylmalate dehydratase
sw_11_scaffold_1239_7
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2973..4367)
DNA (1395bp) protein (465aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264, ECO:0000313|EMBL:EMA01708.1};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRN
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J031_9EURY
sw_11_scaffold_1239_trna_1
unknown

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4451..4523
DNA (73bp)
transferRNA
sw_11_scaffold_1239_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4689..5258)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L698_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28648.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_1239_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5531..5890)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IY83_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA01003.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_11_scaffold_1239_10
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6099..6734
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0JXQ9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26262.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_1239_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6825..7907
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWB6_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01001.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_11_scaffold_1239_12
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7961..8611
DNA (651bp) protein (217aa)
Transcriptional regulator, MarR family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRZ1_HALUD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV13166.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_11_scaffold_1239_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8652..8885)
DNA (234bp) protein (78aa)
Osmotically inducible protein OsmC n=2 Tax=Haladaptatus paucihalophilus RepID=E7QZ46_9EURY
Osmotically inducible protein OsmC {ECO:0000313|EMBL:EFW90207.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
organic hydroperoxide reductase
Displaying 14 items

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