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sw_11_scaffold_982

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_982_1
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..973
DNA (972bp) protein (324aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EAI6_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ44821.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
sw_11_scaffold_982_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1113..1352
DNA (240bp) protein (80aa)
Flavin-nucleotide-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCV6_9EURY
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Flavin-nucleotide-binding protein {ECO:0000313|EMBL:ELZ33321.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
sw_11_scaffold_982_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1660..1812
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JKN3_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09551.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_11_scaffold_982_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1870..2250
DNA (381bp) protein (127aa)
Ba3-type terminal oxidase subunit II n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8I4_9EURY
ba3-type terminal oxidase subunit II
Ba3-type terminal oxidase subunit II {ECO:0000313|EMBL:AGN00669.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_11_scaffold_982_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2539..2982
DNA (444bp) protein (148aa)
Ba3-type terminal oxidase subunit I {ECO:0000313|EMBL:CAP14626.1}; EC=1.9.3.- {ECO:0000313|EMBL:CAP14626.1};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
Ba3-type terminal oxidase subunit I n=2 Tax=Halobacterium salinarum RepID=B0R7A7_HALS3
coxA1; cytochrome c oxidase subunit I
sw_11_scaffold_982_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3022..3888
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKR4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46261.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_11_scaffold_982_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4001..4723)
DNA (723bp) protein (241aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_11_scaffold_982_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4829..5974)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZ03_9EURY
livJ3; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC40965.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteri
sw_11_scaffold_982_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6397..7368)
DNA (972bp) protein (324aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MRJ3_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG92734.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_11_scaffold_982_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7365..9008)
DNA (1644bp) protein (548aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N7Q7_9EURY
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ERG92735.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_11_scaffold_982_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9013..10362)
DNA (1350bp) protein (450aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMQ2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10427.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livH3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_11_scaffold_982_12
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10531..11877)
DNA (1347bp) protein (449aa)
4-aminobutyrate aminotransferase n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YHC1_NATP1
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:AGB31720.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="
sw_11_scaffold_982_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12225..12896
DNA (672bp) protein (224aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MGU1_HALMO
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44553.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
bacterio-opsin activator HTH domain-containing protein
sw_11_scaffold_982_14
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13046..14368
DNA (1323bp) protein (441aa)
hemL1; glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8) Tax=RBG_13_Deltaproteobacteria_47_9_curated
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Putative glutamate-1-semialdehyde aminotransferase n=1 Tax=uncultured archaeon RepID=I3RKF6_9ARCH
sw_11_scaffold_982_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14455..15465
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N735_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53676.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_11_scaffold_982_16
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15462..16358
DNA (897bp) protein (299aa)
Chloromuconate cycloisomerase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDH8_9EURY
Chloromuconate cycloisomerase {ECO:0000313|EMBL:ELY59682.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase
sw_11_scaffold_982_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16366..16572)
DNA (207bp) protein (69aa)
carboxypeptidase Taq (EC:3.4.17.19); K01299 carboxypeptidase Taq [EC:3.4.17.19] id=24649567 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Carboxypeptidase Taq {ECO:0000313|EMBL:ERH10657.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
carboxypeptidase Taq
sw_11_scaffold_982_18
unknown

Not on your lists

17003..17911
DNA (909bp) protein (303aa)

This feature has no annotations

sw_11_scaffold_982_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17878..18516
DNA (639bp) protein (213aa)
Rhomboid family protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMH8_HALUD
Rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ACV12617.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_982_20
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18510..18758
DNA (249bp) protein (83aa)
Peptidase S54 rhomboid family membrane protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D3L5_9EURY
peptidase S54 rhomboid family membrane protein
Peptidase S54 rhomboid family membrane protein {ECO:0000313|EMBL:CCQ34345.1}; Rhomboid family protein {ECO:0000313|EMBL:ERJ06416.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Haloba
sw_11_scaffold_982_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18760..19551
DNA (792bp) protein (264aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW30_9EURY
endonuclease V
sw_11_scaffold_982_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19631..20950
DNA (1320bp) protein (440aa)
short-chain dehydrogenase/reductase SDR id=24647018 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Short-chain dehydrogenase {ECO:0000313|EMBL:ERH11187.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
short-chain dehydrogenase/reductase SDR
sw_11_scaffold_982_23
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20814..21224)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YKP2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY73478.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_11_scaffold_982_24
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21330..22655)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V5I1_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45221.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_11_scaffold_982_25
unknown

Not on your lists

comp(22732..22848)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_11_scaffold_982_26
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22848..24383)
DNA (1536bp) protein (512aa)
Na+/solute symporter n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C2J1_9EURY
Na+/solute symporter {ECO:0000313|EMBL:ELZ17430.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.
Na+/solute symporter
sw_11_scaffold_982_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24384..24647)
DNA (264bp) protein (88aa)
tenA-2; transcriptional activator TenA (EC:3.5.99.2)
Putative transcription activator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DA87_9EURY
Putative transcription activator {ECO:0000313|EMBL:ELZ31637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum p
sw_11_scaffold_982_28
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24635..25300)
DNA (666bp) protein (222aa)
Transcriptional activator, TenA family protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C423_9EURY
Transcriptional activator, TenA family protein {ECO:0000313|EMBL:ELZ17428.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
4-amino-5-aminomethyl-2-methylpyrimidine deaminase
sw_11_scaffold_982_29
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25393..25860
DNA (468bp) protein (156aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1230451 species="Archaea; Euryarchaeo
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KME1_HALAR
sw_11_scaffold_982_30
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25977..26357
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYW0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47543.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
Displaying items 1-30 of 31 in total

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