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sw_11_scaffold_5334

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_5334_1

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comp(2..772)
DNA (771bp) protein (257aa)
Epimerase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SN22_9EURY
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN06470.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_5334_2
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1314..1565
DNA (252bp) protein (84aa)
Major facilitator superfamily protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8J4_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELY70395.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme
sugar phosphate permease
sw_11_scaffold_5334_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1810..2229
DNA (420bp) protein (140aa)
TP repeat protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EE0_HALWD
chitinase
TP repeat protein {ECO:0000313|EMBL:CAJ53689.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM 1
sw_11_scaffold_5334_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2229..3314
DNA (1086bp) protein (362aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LHN7_HALJP
Thymidylate synthase {ECO:0000313|EMBL:EMA31495.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;
sw_11_scaffold_5334_5
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3325..3861
DNA (537bp) protein (179aa)
dihydrofolate reductase region (EC:1.5.1.3)
Dihydrofolate reductase region n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P611_9EURY
Dihydrofolate reductase region {ECO:0000313|EMBL:EMA65491.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 1
sw_11_scaffold_5334_6
unknown

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3898..4044
DNA (147bp) protein (49aa)

This feature has no annotations

sw_11_scaffold_5334_7
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3986..5062)
DNA (1077bp) protein (359aa)
cysteine desulfurase (EC:2.8.1.7) id=24634893 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
csd2; cysteine desulfurase (EC:4.4.1.-)
Selenocysteine lyase {ECO:0000313|EMBL:ERH04919.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
sw_11_scaffold_5334_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5187..5633
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CU94_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48102.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_5334_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5666..6400)
DNA (735bp) protein (245aa)
pcm2; protein-L-isoaspartate O-methyltransferase 2 (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=24655203 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
protein-L-isoaspartate(D-aspartate)O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate carboxylmethyltransferase {ECO:0000313|EMBL:ERG88715.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
Displaying 9 items

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