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sw_11_scaffold_1108

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1108_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..238
DNA (237bp) protein (79aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227488 species="A
2'-5' RNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIP7_9EURY
2'-5' RNA ligase
sw_11_scaffold_1108_2

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481..633
DNA (153bp) protein (51aa)
Ribosomal protein L39e n=1 Tax=uncultured organism RepID=M1P2K2_9ZZZZ
Ribosomal protein L39e {ECO:0000313|EMBL:AGF93646.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ribosomal protein L39E
sw_11_scaffold_1108_3
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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630..908
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AG12_NATGS
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium greg
sw_11_scaffold_1108_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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911..1579
DNA (669bp) protein (223aa)
translation initiation factor eIF-6; K03264 translation initiation factor 6 id=24647556 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
translation initiation factor IF-6
sw_11_scaffold_1108_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1737..2699
DNA (963bp) protein (321aa)
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
Phytoene synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNP8_9EURY
phytoene/squalene synthetase
sw_11_scaffold_1108_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2721..3620)
DNA (900bp) protein (300aa)
Carotene biosynthesis associated membrane protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P867_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:ERG89752.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
carotenoid biosynthesis protein
sw_11_scaffold_1108_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3613..4497)
DNA (885bp) protein (295aa)
lye; lycopene elongase (EC:2.5.1.-)
UbiA prenyltransferase n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCD1_9EURY
UbiA prenyltransferase {ECO:0000313|EMBL:ERG89751.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_11_scaffold_1108_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4773..5714
DNA (942bp) protein (314aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
etfB2; electron transfer flavoprotein subunit beta
sw_11_scaffold_1108_9
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5715..5900
DNA (186bp) protein (62aa)
Electron transfer flavoprotein subunit alpha n=2 Tax=Haloarcula RepID=M0JW43_9EURY
etfA1; electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EMA12598.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
sw_11_scaffold_1108_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5846..7315
DNA (1470bp) protein (490aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF2_HALMD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACV48720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
sw_11_scaffold_1108_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7308..7694
DNA (387bp) protein (129aa)
Flavoprotein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6B5_HALJB
flavoprotein
Flavoprotein {ECO:0000313|EMBL:ADJ15833.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain D
Displaying 11 items

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