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sw_11_scaffold_1964

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1964_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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416..1174
DNA (759bp) protein (253aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
sw_11_scaffold_1964_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1296..1979
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:ELZ27303.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_0
nthA; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXD3_9EURY
sw_11_scaffold_1964_3
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2036..2788
DNA (753bp) protein (251aa)
UspA domain protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LSI5_HALLT
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:ACM57932.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATC
sw_11_scaffold_1964_4
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2785..4173)
DNA (1389bp) protein (463aa)
Amino acid transport protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NRI1_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA59829.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13
cat5; transport protein (probable substrate cationic amino acids)
sw_11_scaffold_1964_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4166..4633)
DNA (468bp) protein (156aa)
NUDIX hydrolase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1T5_HALMD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACV49175.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain
sw_11_scaffold_1964_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4780..5139
DNA (360bp) protein (120aa)
ribosomal protein S10-like protein id=24655156 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
30S ribosomal protein S10
sw_11_scaffold_1964_7
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5233..5805)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKJ9_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ73570.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_11_scaffold_1964_8
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5868..6614
DNA (747bp) protein (249aa)
S-adenosylmethionine hydroxide adenosyltransferase family protein n=2 Tax=Halobacterium salinarum RepID=B0R327_HALS3
hypothetical protein
S-adenosylmethionine hydroxide adenosyltransferase family protein {ECO:0000313|EMBL:CAP13137.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobact
sw_11_scaffold_1964_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6676..7467)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31580.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_11_scaffold_1964_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7693..8478
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F7P2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54639.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_11_scaffold_1964_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8602..8817)
DNA (216bp) protein (72aa)
Abortive infection protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AF03_NATGS
metal-dependent membrane protease
Metal-dependent membrane protease {ECO:0000313|EMBL:EJN60679.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_11_scaffold_1964_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9483..11387)
DNA (1905bp) protein (635aa)
lonB; ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=24653927 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
lon; ATP-dependent protease Lon (EC:3.4.21.53)
Lon-related putative ATP-dependent protease {ECO:0000313|EMBL:ERG88277.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_11_scaffold_1964_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11781..12113
DNA (333bp) protein (111aa)
Nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
Nicotinamide-nucleotide adenylyltransferase (Fragment) n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XD11_9EURY
Displaying 13 items

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