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sw_11_scaffold_2289

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2289_1

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272..1183
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDZ4_9ARCH
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ESS06199.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
nucleoside-diphosphate sugar epimerase
sw_11_scaffold_2289_trna_1
unknown

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comp(1554..1628)
DNA (75bp)
transferRNA
sw_11_scaffold_2289_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1871..2515
DNA (645bp) protein (215aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK56_9EURY
sw_11_scaffold_2289_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2576..3025)
DNA (450bp) protein (150aa)
hypothetical protein id=24647044 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH11213.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ATPase
sw_11_scaffold_2289_4
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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3459..4451
DNA (993bp) protein (331aa)
# 613615 # 614127 # -1 # ;gc_cont=0.585 id=18315085 bin=Nanosalinarum tax=Nanosalinarum
# 613615 # 614127 # -1 # ;gc_cont=0.585 id=18315085 bin=Nanosalinarum tax=Nanosalinarum
sw_11_scaffold_2289_5
unknown

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4778..4891
DNA (114bp) protein (38aa)

This feature has no annotations

sw_11_scaffold_2289_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5034..5774
DNA (741bp) protein (247aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ5_HALMD
sw_11_scaffold_2289_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5767..6462
DNA (696bp) protein (232aa)
proteasome endopeptidase complex protein (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome subunit beta n=1 Tax=Halomicrobium katesii RepID=UPI0003669C8E
sw_11_scaffold_2289_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6584..7921
DNA (1338bp) protein (446aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=halophilic archaeon J07HX64 RepID=U1QST4_9EURY
truD; tRNA pseudouridine synthase D
sw_11_scaffold_2289_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7973..8569)
DNA (597bp) protein (199aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Halofer
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFQ9_9EURY
hypothetical protein
Displaying 10 items

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