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sw_11_scaffold_2884

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2884_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..160)
DNA (159bp) protein (53aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227488 species="A
2'-5' RNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIP7_9EURY
2'-5' RNA ligase
sw_11_scaffold_2884_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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214..969
DNA (756bp) protein (252aa)
TPR repeat-containing protein id=24644464 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
sw_11_scaffold_2884_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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971..1270
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89770.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_11_scaffold_2884_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1379..2626
DNA (1248bp) protein (416aa)
Cysteine desulfurase, SufS subfamily n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMU1_HALUD
cysteine desulfurase, SufS subfamily
Cysteine desulfurase, SufS subfamily {ECO:0000313|EMBL:ACV11404.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus ut
sw_11_scaffold_2884_5
unknown

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comp(2672..3166)
DNA (495bp) protein (165aa)

This feature has no annotations

sw_11_scaffold_2884_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3447..4796)
DNA (1350bp) protein (450aa)
LemA domain-containing protein id=24649637 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10727.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_2884_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5125..5976
DNA (852bp) protein (284aa)
hypothetical protein id=24646887 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative membrane protein {ECO:0000313|EMBL:ERH11050.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_2884_8
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6103..6252
DNA (150bp) protein (50aa)
purine-nucleoside phosphorylase (EC:2.4.2.1)
Uridine phosphorylase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CTI2_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ25968.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563
Displaying 8 items

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