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sw_11_scaffold_345

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_345_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..765)
DNA (765bp) protein (255aa)
Glycosyltransferase n=1 Tax=halophilic archaeon J07HX5 RepID=U1P5Z0_9EURY
Glycosyltransferase {ECO:0000313|EMBL:ERG88957.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
glycosyltransferase
sw_11_scaffold_345_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

927..1490
DNA (564bp) protein (188aa)
Response regulator receiver protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA5_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:ELZ27417.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
response regulator receiver protein
sw_11_scaffold_345_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2244..2933
DNA (690bp) protein (230aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1227465 species="Archaea; Euryarc
DNA primase DnaG n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EFR1_9EURY
DNA primase
sw_11_scaffold_345_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2988..4304)
DNA (1317bp) protein (439aa)
Putative membrane protein {ECO:0000313|EMBL:ERG88627.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein id=24654372 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
conserved hypothetical membrane protein (DUF92)
sw_11_scaffold_345_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4464..5021
DNA (558bp) protein (186aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Undecaprenyl pyrophosphate synthetase {ECO:0000313|EMBL:CCQ32341.1}; EC=2.5.1.31 {ECO:0000313|EMBL:CCQ32341.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Undecaprenyl diphosphate synthase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E3Y3_9EURY
sw_11_scaffold_345_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5060..5899
DNA (840bp) protein (280aa)
Htr-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E4Y7_9EURY
HTR-like protein
HTR-like protein {ECO:0000313|EMBL:CCQ34208.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
sw_11_scaffold_345_7
unknown

Not on your lists

comp(6169..6642)
DNA (474bp) protein (158aa)

This feature has no annotations

sw_11_scaffold_345_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6857..7210
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWC3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26948.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_345_9
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7207..7884
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVK7_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26598.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_345_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7950..9011
DNA (1062bp) protein (354aa)
Aminoglycoside phosphotransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KS69_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EMA24142.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylol
aminoglycoside phosphotransferase
sw_11_scaffold_345_trna_1
unknown

Not on your lists

comp(9236..9320)
DNA (85bp)
transferRNA
sw_11_scaffold_345_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9348..9710
DNA (363bp) protein (121aa)
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIY9_9EURY
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH10074.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
tfbA_4; transcription initiation factor TFB 4
sw_11_scaffold_345_12
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9711..10223)
DNA (513bp) protein (171aa)
Cytidyltransferase-related domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRF3_HALUD
phosphopantetheine adenylyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV10590.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_11_scaffold_345_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10414..11028)
DNA (615bp) protein (205aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_11_scaffold_345_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11081..11716)
DNA (636bp) protein (212aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1085028 species="Archaea; Euryarchaeota; Halo
DNA polymerase IV n=1 Tax=halophilic archaeon J07HX64 RepID=U1QR25_9EURY
nucleotidyltransferase/DNA polymerase involved in DNA repair
sw_11_scaffold_345_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12600..13277
DNA (678bp) protein (226aa)
Uncharacterized protein id=24644395 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_345_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13335..13727)
DNA (393bp) protein (131aa)
DUF35 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSS5_NATM8
DUF35 family protein
DUF35 family protein {ECO:0000313|EMBL:CCQ37443.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (str
sw_11_scaffold_345_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13724..14893)
DNA (1170bp) protein (390aa)
acaB2; acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CCQ37444.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CCQ37444.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Acetyl-CoA C-acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLC0_NATM8
sw_11_scaffold_345_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14887..15630)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KW99_HALAR
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA30300.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
3-ketoacyl-ACP reductase
sw_11_scaffold_345_19
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15834..16337)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BE39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09090.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
sw_11_scaffold_345_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16549..17838
DNA (1290bp) protein (430aa)
PBS lyase HEAT domain-containing protein repeat-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHS4_9EURY
PBS lyase HEAT domain-containing protein repeat-containing protein {ECO:0000313|EMBL:ELZ22786.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
PBS lyase HEAT domain-containing protein repeat-containing protein
sw_11_scaffold_345_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17871..19010)
DNA (1140bp) protein (380aa)
CBS domain-containing membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLE0_9EURY
CBS domain-containing membrane protein {ECO:0000313|EMBL:ELZ23187.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
signal transduction protein with CBS domains
sw_11_scaffold_345_22
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19228..19860
DNA (633bp) protein (211aa)
Rhomboid family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LQU4_9EURY
Rhomboid family protein {ECO:0000313|EMBL:EMA35861.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
Rhomboid family protein
sw_11_scaffold_345_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19867..20721
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_345_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20718..21278)
DNA (561bp) protein (187aa)
NUDIX hydrolase id=24650061 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
NUDIX domain protein {ECO:0000313|EMBL:ERH11140.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
NUDIX hydrolase
sw_11_scaffold_345_25
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21422..23827)
DNA (2406bp) protein (802aa)
Heavy metal translocating P-type ATPase n=1 Tax=Natronococcus occultus SP4 RepID=L0K3S3_9EURY
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGB39671.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus o
heavy metal translocating P-type ATPase
sw_11_scaffold_345_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23965..25362)
DNA (1398bp) protein (466aa)
UPF0272 protein C475_16064 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIR4_9EURY
hypothetical protein
UPF0272 protein C475_16064 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
sw_11_scaffold_345_27

Not on your lists

comp(25424..26647)
DNA (1224bp) protein (408aa)
Phosphate/sulfate permease n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVM9_9ARCH
Phosphate/sulfate permease {ECO:0000313|EMBL:ESS04241.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
phosphate/sulfate permease
sw_11_scaffold_345_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26776..27357
DNA (582bp) protein (194aa)
Response regulator receiver protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ69_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:EFW89990.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
response regulator receiver protein
sw_11_scaffold_345_29
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27354..28799)
DNA (1446bp) protein (482aa)
PAS/PAC sensor protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BTZ4_9EURY
PAS/PAC sensor protein {ECO:0000313|EMBL:ELZ13873.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
PAS/PAC sensor protein
Displaying 30 items

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