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sw_11_scaffold_630

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_630_1

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comp(3..83)
DNA (81bp) protein (27aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_11_scaffold_630_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(83..547)
DNA (465bp) protein (155aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=24646827 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rpl30p; 50S ribosomal protein L30P
sw_11_scaffold_630_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(544..1188)
DNA (645bp) protein (215aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=24646826 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
SSU ribosomal protein S5P {ECO:0000313|EMBL:ERH10991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps5p; 30S ribosomal protein S5P
sw_11_scaffold_630_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1185..1745)
DNA (561bp) protein (187aa)
50S ribosomal protein L18P n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=RL18_HALMA
rpl18p; 50S ribosomal protein L18
50S ribosomal protein L18; Hl12; Hmal18; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 43049
sw_11_scaffold_630_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1745..2194)
DNA (450bp) protein (150aa)
50S ribosomal protein L19e n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G9_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
rpl19e; 50S ribosomal protein L19
sw_11_scaffold_630_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2191..3294)
DNA (1104bp) protein (368aa)
50S ribosomal protein L32e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y2_9EURY
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000313|EMBL:AGN02183.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bs
sw_11_scaffold_630_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3294..3821)
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKI2_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
rplF; 50S ribosomal protein L6P
sw_11_scaffold_630_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3869..4261)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4D5_HALMD
rps8p; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
sw_11_scaffold_630_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4258..4437)
DNA (180bp) protein (60aa)
30S ribosomal protein S14 type Z n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIM3_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
rps14P; 30S ribosomal protein S14P
sw_11_scaffold_630_10
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4434..4961)
DNA (528bp) protein (176aa)
50S ribosomal protein L5 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MMW8_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens
rpl5p; 50S ribosomal protein L5
sw_11_scaffold_630_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4958..5695)
DNA (738bp) protein (246aa)
30S ribosomal protein S4e n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCA5_HALAR
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinen
rps4E; 30S ribosomal protein S4
sw_11_scaffold_630_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5688..6050)
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI8_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpl24p; 50S ribosomal protein L24P
sw_11_scaffold_630_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6047..6445)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMN3_9EURY
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rpl14; 50S ribosomal protein L14
sw_11_scaffold_630_14
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6445..6834)
DNA (390bp) protein (130aa)
30S ribosomal protein S17P n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X184_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:ELY54353.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus
archaeal ribosomal protein S17P
sw_11_scaffold_630_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6825..7112)
DNA (288bp) protein (96aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
ribonuclease P n=1 Tax=Halomicrobium katesii RepID=UPI00037B98D9
ribonuclease P, Rpp29
sw_11_scaffold_630_16
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7113..7334)
DNA (222bp) protein (74aa)
50S ribosomal protein L29P n=1 Tax=Halonotius sp. J07HN6 RepID=U1NT77_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
50S ribosomal protein L29P
sw_11_scaffold_630_17
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7331..7549)
DNA (219bp) protein (73aa)
30S ribosomal protein S3 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKT0_9EURY
30S ribosomal protein S3e (S3p)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
Displaying 17 items

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