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sw_11_scaffold_3142_4

Organism: SW_11_Halococcus_66_16

partial RP 16 / 55 MC: 2 BSCG 8 / 51 ASCG 15 / 38
Location: comp(1928..2575)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 215.0
  • Bit_score: 335
  • Evalue 4.70e-89
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 215.0
  • Bit_score: 336
  • Evalue 3.00e-89
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 224.0
  • Bit_score: 220
  • Evalue 4.70e-55

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 648
GTGCTCGGCGCGGTGCTCGGGTACGCGGCACGGGGCACACTCAGCGCGATCATCGCCGGGTTCGTGTTGCTGTTCTCGCGACCGTTCCGGGTGGGCGACTGGATCATCATCGAGGAGTACGAGGGGGTGGTCCGGGAGGTCACCATCGTCAACACCAAGATCCGGACGTTCGACGACGAGCACGTGCTGATCCCGAACGACGAGATCACCAACAACTTCCTCGTCAACCGCACGCGGAACGACCGATACCGGGTCGACATCGACGTGAGCGTGGACTACGACACCGACCTCGGCGAGGCGATGGACGTGACGACGGACGCGATGGAAGGGTGTGACGACCGGATCAGAGAGCAGCCCTCGCCGCGGGCGGTGTTGAAACGCTTTGCGGACTCGGGGATCGTCCTCGAACTCCGCTTTTGGGTCGATAATCCGAGCGCGAGGCGCGTCTGGGAGGCGAGGAGCGCCGTCGTGCAGTCGGTGAAGGAAGCCTTCGACCGCGAGGGGATCGTCATCCCGTTCCCCCAGCGCACGCTCAACGCGAGGGAGCAGTCGGGGTTCGGCGTCGCCGATCGCGGCGTGTCCGAGCGCAGCGGGGCGGGCGAGCGAGCGCCGGGGTCGACCACGGCGACCGACGGCGGCGAGGACTGA
PROTEIN sequence
Length: 216
VLGAVLGYAARGTLSAIIAGFVLLFSRPFRVGDWIIIEEYEGVVREVTIVNTKIRTFDDEHVLIPNDEITNNFLVNRTRNDRYRVDIDVSVDYDTDLGEAMDVTTDAMEGCDDRIREQPSPRAVLKRFADSGIVLELRFWVDNPSARRVWEARSAVVQSVKEAFDREGIVIPFPQRTLNAREQSGFGVADRGVSERSGAGERAPGSTTATDGGED*