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sw_11_scaffold_3142

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3142_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..715)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D7Z5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ31586.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_11_scaffold_3142_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1102..1365)
DNA (264bp) protein (88aa)
Copper-translocating P-type ATPase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9W6_9EURY
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ELZ31598.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
sw_11_scaffold_3142_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1452..1928)
DNA (477bp) protein (159aa)
Methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ74_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA47877.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
HemK-related putative methylase
sw_11_scaffold_3142_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1928..2575)
DNA (648bp) protein (216aa)
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
mechanosensitive ion channel protein MscS
sw_11_scaffold_3142_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2599..3012)
DNA (414bp) protein (138aa)
Mechanosensitive ion channel MscS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUS1_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA49053.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
mechanosensitive ion channel MscS
sw_11_scaffold_3142_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3140..3325)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49054.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_11_scaffold_3142_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3383..4261)
DNA (879bp) protein (293aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB8_9EURY
sw_11_scaffold_3142_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4341..4928)
DNA (588bp) protein (196aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
sw_11_scaffold_3142_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4968..5324)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY
sw_11_scaffold_3142_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5321..5611)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT09_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L21e
sw_11_scaffold_3142_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5911..6096)
DNA (186bp) protein (62aa)
Zn-ribbon RNA-binding protein n=2 Tax=Halococcus RepID=M0MQH5_9EURY
Zn-ribbon RNA-binding protein {ECO:0000313|EMBL:EMA49060.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
hypothetical protein
sw_11_scaffold_3142_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6240..7466)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49061.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_11_scaffold_3142_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7471..8427)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N3U0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA51370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_11_scaffold_3142_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8494..9264)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47888.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_11_scaffold_3142_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9669..10313
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW72_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA49064.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
sw_11_scaffold_3142_16
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11020..11619
DNA (600bp) protein (200aa)
Response regulator receiver protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJJ0_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:EMA68915.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingen
hlx5; HoxA-like transcriptional regulator
sw_11_scaffold_3142_17
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11638..11910)
DNA (273bp) protein (91aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACM57287.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACM57287.1};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Putative circadian clock protein, KaiC n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPJ9_HALLT
Displaying 17 items

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