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sw_12_scaffold_1001

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1001_1
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..2044
DNA (2043bp) protein (681aa)
PAS domain S-box n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC85_HALRX
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB15816.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 / JCM 13
sw_12_scaffold_1001_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2267..3019)
DNA (753bp) protein (251aa)
Cruxrhodopsin-1 n=1 Tax=Haloarcula argentinensis RepID=BACR_HALAR
Cruxrhodopsin-1; Short=COP-1;; Short=CR-1;; TaxID=43776 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis.;"
rhodopsin
sw_12_scaffold_1001_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3323..3568
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCB9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88315.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_1001_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3578..4813)
DNA (1236bp) protein (412aa)
Amino acid/amide ABC transporter membrane protein 2, haat family n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W994_9EURY
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:AGN01289.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.
sw_12_scaffold_1001_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5007..6002)
DNA (996bp) protein (332aa)
Inner-membrane translocator n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7X5_9EURY
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AGN01288.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-B
sw_12_scaffold_1001_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5999..6697)
DNA (699bp) protein (233aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK5_HALBP
amino acid/amide ABC transporter ATP-binding protein 2, haat family
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ADQ67057.1}; Amino acid/amide ABC transporter ATP-binding protein 2, haat family {ECO:0000313|EMBL:ELY29604.1}; Ta
sw_12_scaffold_1001_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6694..7497)
DNA (804bp) protein (268aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24259.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
sw_12_scaffold_1001_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7499..8938)
DNA (1440bp) protein (480aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVQ8_9EURY
branched-chain amino acid ABC transporter amino acid-binding protein
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:AGN01285.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarcha
sw_12_scaffold_1001_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9038..9994)
DNA (957bp) protein (319aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLN0_NATM8
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCQ38008.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
sw_12_scaffold_1001_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10205..10657
DNA (453bp) protein (151aa)
Uncharacterized protein id=24615850 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88174.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_12_scaffold_1001_11
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10659..11366)
DNA (708bp) protein (236aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E5H9_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELZ42172.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="
putative DNA binding protein
sw_12_scaffold_1001_12
unknown

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comp(11978..12346)
DNA (369bp) protein (123aa)

This feature has no annotations

sw_12_scaffold_1001_13
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12580..13791)
DNA (1212bp) protein (404aa)
Acyl-CoA synthetase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PCI2_9EURY
Acyl-CoA synthetase {ECO:0000313|EMBL:EMA67244.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
sw_12_scaffold_1001_14
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13743..14168)
DNA (426bp) protein (142aa)
Acyl-CoA synthetase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E316_9EURY
Acyl-CoA synthetase {ECO:0000313|EMBL:ELZ42171.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288
acyl-CoA synthetase
sw_12_scaffold_1001_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14187..15071
DNA (885bp) protein (295aa)
lipase, class 2 (EC:3.1.1.-)
Lipase, class 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTM4_NATM8
EstB-type esterase domain protein {ECO:0000313|EMBL:CCQ37867.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
Displaying 15 items

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