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sw_12_scaffold_1154

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1154_1
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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165..452
DNA (288bp) protein (96aa)
Translation initiation factor 1A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF1A_NATPD
Translation initiation factor eIF-1A {ECO:0000313|EMBL:AKH98504.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanae
tif1A_1; translation initiation factor IF-1A
sw_12_scaffold_1154_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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462..1352
DNA (891bp) protein (297aa)
Atypical protein kinase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GYY1_HALVD
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000313|EMBL:CQR49312.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Ar
rio1; atypical protein kinase
sw_12_scaffold_1154_3
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1383..1757)
DNA (375bp) protein (125aa)
hypothetical protein
hypothetical protein id=24641993 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Putative membrane protein {ECO:0000313|EMBL:ERH11981.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
sw_12_scaffold_1154_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1890..2441
DNA (552bp) protein (184aa)
KH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3Y4_HALXS
KH domain-containing protein
KH domain protein {ECO:0000313|EMBL:AEH36237.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 /
sw_12_scaffold_1154_5
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2472..3389
DNA (918bp) protein (306aa)
Mvp-type potassium channel superfamily protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0QSM1_9EURY
Mvp-type potassium channel superfamily protein {ECO:0000313|EMBL:EMA58242.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
kch; Kef-type K+ transporter NAD-binding component
sw_12_scaffold_1154_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3416..5113
DNA (1698bp) protein (566aa)
Thermosome subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE8_9EURY
Thermosome subunit alpha {ECO:0000313|EMBL:EMA55181.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
thermosome
sw_12_scaffold_1154_7
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5225..5692)
DNA (468bp) protein (156aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1G2_9EURY
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:ELY66718.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema v
AsnC family transcriptional regulator
sw_12_scaffold_1154_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5797..7155
DNA (1359bp) protein (453aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y0F9_9EURY
sw_12_scaffold_1154_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7137..8528)
DNA (1392bp) protein (464aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DNG2_9EURY
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ELZ36368.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
hypothetical protein
sw_12_scaffold_1154_10
unknown

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comp(8566..9069)
DNA (504bp) protein (168aa)

This feature has no annotations

sw_12_scaffold_1154_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9219..10262
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3F7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ17735.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
endonuclease/exonuclease/phosphatase
sw_12_scaffold_1154_12
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10348..12033
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NVI8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW59279.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orie
sw_12_scaffold_1154_13
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12135..14201)
DNA (2067bp) protein (689aa)
Helicase c2 n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BRZ3_NATSJ
helicase
Helicase {ECO:0000313|EMBL:AHF98405.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_12_scaffold_1154_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(14864..15520)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A5H0_THESM
hypothetical protein
sw_12_scaffold_1154_15
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15487..16110)
DNA (624bp) protein (208aa)
hypothetical protein id=24651359 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Uncharacterized protein {ECO:0000313|EMBL:ERH13876.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_12_scaffold_1154_16

Not on your lists

comp(16512..18380)
DNA (1869bp) protein (623aa)
5'-nucleotidase (EC:3.1.3.5)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y9G9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07702.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_1154_17
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18471..18599)
DNA (129bp) protein (43aa)
Helicase c2 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C682_9EURY
DEAD_2 domain protein
Helicase c2 {ECO:0000313|EMBL:ELZ18715.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
sw_12_scaffold_1154_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18637..19644)
DNA (1008bp) protein (336aa)
Putative membrane protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JXC4_9EURY
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB37406.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_1154_19
unknown

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20020..20568
DNA (549bp) protein (183aa)

This feature has no annotations

Displaying 19 items

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