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sw_12_scaffold_1288

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1288_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..282)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48150.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_1288_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(306..872)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036E1279
Uncharacterized protein {ECO:0000313|EMBL:EMA48695.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_1288_3
unknown

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comp(979..1854)
DNA (876bp) protein (292aa)

This feature has no annotations

sw_12_scaffold_1288_4
unknown

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comp(2160..2363)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_12_scaffold_1288_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2886..3131)
DNA (246bp) protein (82aa)
Transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N293_9EURY
Transposase {ECO:0000313|EMBL:EMA51254.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
tnp; transposase
sw_12_scaffold_1288_6
unknown

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comp(3674..4327)
DNA (654bp) protein (218aa)

This feature has no annotations

sw_12_scaffold_1288_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4402..5160)
DNA (759bp) protein (253aa)
IclR family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGK1_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:EMA44841.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
IclR family transcriptional regulator
sw_12_scaffold_1288_8
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5337..6797
DNA (1461bp) protein (487aa)
acetyl-CoA hydrolase (EC:3.1.2.1)
Succinate CoA transferase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HSC4_9EURY
Succinate CoA transferase {ECO:0000313|EMBL:ELZ87396.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-15
sw_12_scaffold_1288_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6859..7428
DNA (570bp) protein (190aa)
fadB_4; enoyl-CoA hydratase II 4 (EC:4.2.1.17)
MaoC family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITI4_NATPD
MaoC domain protein {ECO:0000313|EMBL:CAI48549.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_1288_10
unknown

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7775..7867
DNA (93bp) protein (31aa)

This feature has no annotations

sw_12_scaffold_1288_11
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7860..8954
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K0N7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37688.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_1288_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9122..10240
DNA (1119bp) protein (373aa)
Aryl-alcohol dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVV3_9EURY
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:ELZ27376.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
alcohol dehydrogenase
sw_12_scaffold_1288_13
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10317..11555
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SGS0_9EURY
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ELY55392.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus am
sw_12_scaffold_1288_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11616..13094)
DNA (1479bp) protein (493aa)
Aldehyde Dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDZ3_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHG04849.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
aldehyde dehydrogenase
sw_12_scaffold_1288_15
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13345..13947
DNA (603bp) protein (201aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Halobacterium sp. DL1 RepID=G4ID80_9EURY
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KDE60149.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.
hypothetical protein
sw_12_scaffold_1288_16
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14026..14274
DNA (249bp) protein (83aa)
coxS; carbon-monoxide dehydrogenase small subunit (EC:1.2.99.2)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1W2_9EURY
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:ELZ16643.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrige
sw_12_scaffold_1288_17
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14271..14444
DNA (174bp) protein (58aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D365_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE60148.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_12_scaffold_1288_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14852..16759
DNA (1908bp) protein (636aa)
Carbon-monoxide dehydrogenase (Acceptor) n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C2T5_9EURY
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KDE60147.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
sw_12_scaffold_1288_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16759..17643
DNA (885bp) protein (295aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPQ0_9EURY
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:EMA47338.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
molybdopterin dehydrogenase FAD-binding protein
sw_12_scaffold_1288_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17695..18108
DNA (414bp) protein (138aa)
Transposase IS4 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9K4_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA54536.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
transposase IS4 family protein
Displaying 20 items

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