ggKbase home page

sw_12_scaffold_1410

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1410_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1..165
DNA (165bp) protein (55aa)
50S ribosomal protein L7Ae n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP42_9EURY
30S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_12_scaffold_1410_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


166..390
DNA (225bp) protein (75aa)
30S ribosomal protein S28e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W697_9EURY
rps28e; 30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harch
sw_12_scaffold_1410_3
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


395..595
DNA (201bp) protein (67aa)
50S ribosomal protein L24E n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A9Q5_9EURY
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000313|EMBL:ELY98328.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 109
sw_12_scaffold_1410_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

621..1058
DNA (438bp) protein (146aa)
ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VSS2_9EURY
sw_12_scaffold_1410_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1206..1691
DNA (486bp) protein (162aa)
Molecular chaperone n=1 Tax=Halogranum salarium B-1 RepID=J3EVQ7_9EURY
Molecular chaperone {ECO:0000313|EMBL:EJN58752.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
molecular chaperone
sw_12_scaffold_1410_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1698..3572
DNA (1875bp) protein (625aa)
Protein kinase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DF37_9EURY
putative unusual protein kinase
Putative unusual protein kinase {ECO:0000313|EMBL:AGN00637.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harc
sw_12_scaffold_1410_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3590..4819
DNA (1230bp) protein (410aa)
aspartate transaminase (EC:2.6.1.1)
Class I and II aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7E1_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA53473.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
sw_12_scaffold_1410_8
unknown

Not on your lists

5018..5737
DNA (720bp) protein (240aa)

This feature has no annotations

sw_12_scaffold_1410_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5734..6096
DNA (363bp) protein (121aa)
UPF0212 protein C448_13981 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4Z7_HALMO
UPF0212 protein C448_13981 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
hypothetical protein
sw_12_scaffold_1410_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6141..6680
DNA (540bp) protein (180aa)
HTH/CBS domain protein n=2 Tax=Halobacterium salinarum RepID=B0R4C6_HALS3
HTH/hypothetical protein
HTH/CBS domain protein {ECO:0000313|EMBL:CAP13591.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_12_scaffold_1410_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6734..8086
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003789040
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46753.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_1410_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8169..8630
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W410_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00842.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_1410_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8632..8928
DNA (297bp) protein (99aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020};; TaxID=519442 species="Archaea; Eu
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNR4_HALUD
phosphoribosyl-ATP diphosphatase
sw_12_scaffold_1410_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8970..9365)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLG8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37690.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_1410_15
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9423..10400
DNA (978bp) protein (326aa)
GTP-binding protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZD2_9EURY
GTP-binding protein HSR1-related
GTP-binding protein HSR1-related {ECO:0000313|EMBL:ACV11335.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahen
sw_12_scaffold_1410_16
unknown

Not on your lists

comp(10405..10701)
DNA (297bp) protein (99aa)

This feature has no annotations

sw_12_scaffold_1410_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10972..11898
DNA (927bp) protein (309aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=24615068 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1324957 species="Ar
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
sw_12_scaffold_1410_18
unknown

Not on your lists

11895..12011
DNA (117bp) protein (39aa)

This feature has no annotations

sw_12_scaffold_1410_19
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12008..12331
DNA (324bp) protein (108aa)
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:AKH98071.1}; EC=2.1.3.2 {ECO:0000313|EMBL:AKH98071.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
Aspartate carbamoyltransferase regulatory chain n=1 Tax=uncultured archaeon A07HR67 RepID=V4X7I8_9ARCH
aspartate carbamoyltransferase regulatory subunit
sw_12_scaffold_1410_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12427..14001
DNA (1575bp) protein (525aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=485914 species="Archaea;
Tryptophan--tRNA ligase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZB1_HALMD
sw_12_scaffold_1410_21
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14283..15620)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CKS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23885.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_12_scaffold_1410_22
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15623..16186)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CPT4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23884.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_12_scaffold_1410_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16140..17078)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTN0_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12220.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_1410_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17071..18471)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L239_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA27652.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_1410_25
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18473..20197)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZ36_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59960.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_12_scaffold_1410_26
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20606..20998)
DNA (393bp) protein (131aa)
IS240-type transposase (ISH102) n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DEB5_9EURY
IS240-type transposase (ISH102) {ECO:0000313|EMBL:ELZ33143.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichen
transposase
sw_12_scaffold_1410_27

Not on your lists

21201..21440
DNA (240bp) protein (80aa)
Aminotransferase class I and II n=1 Tax=halophilic archaeon DL31 RepID=G2MH29_9ARCH
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:AEN06275.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 27 items

View Taxonomy