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sw_12_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_153_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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631..1203
DNA (573bp) protein (191aa)
Dihydrodipicolinate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI08_9EURY
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EMA44973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
dihydrodipicolinate synthase
sw_12_scaffold_153_2
unknown

Not on your lists

comp(1242..1709)
DNA (468bp) protein (156aa)

This feature has no annotations

sw_12_scaffold_153_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1887..2567)
DNA (681bp) protein (227aa)
PyrE-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSQ0_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6
orotate phosphoribosyltransferase-like protein
sw_12_scaffold_153_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2778..4139
DNA (1362bp) protein (454aa)
Cytochrome P450 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQM1_NATM8
cyc1; cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:CCQ36470.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain D
sw_12_scaffold_153_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4481..4792)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTT9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10928.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_153_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4980..5645)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME04_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43976.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
Uncharacterized protein family (UPF0153)
sw_12_scaffold_153_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5661..6551)
DNA (891bp) protein (297aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase {ECO:0000313|EMBL:AEH35339.1}; EC=4.1.1.31 {ECO:0000313|EMBL:AEH35339.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halo
Phosphoenolpyruvate carboxylase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D693_HALXS
sw_12_scaffold_153_8
unknown

Not on your lists

7097..7321
DNA (225bp) protein (75aa)

This feature has no annotations

sw_12_scaffold_153_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8464..8784)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B6_9EURY
tfs2; transcription elongation factor TFS
sw_12_scaffold_153_10
unknown

Not on your lists

9026..9259
DNA (234bp) protein (78aa)

This feature has no annotations

sw_12_scaffold_153_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9344..9628)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3C1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15228.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_153_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9774..10598)
DNA (825bp) protein (275aa)
HTR-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQL4_HALAR
homolog to KaiC-like transcription regulator
HTR-like protein {ECO:0000313|EMBL:EMA23501.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282
sw_12_scaffold_153_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10724..11698)
DNA (975bp) protein (325aa)
Beta-ribofuranosylaminobenzene 5'-phosphate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFC0_9EURY
Beta-ribofuranosylaminobenzene 5'-phosphate synthase {ECO:0000313|EMBL:EMA44432.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
beta-ribofuranosylaminobenzene 5'-phosphate synthase family
sw_12_scaffold_153_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11883..13469
DNA (1587bp) protein (529aa)
Formate/nitrite transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS4_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA50882.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hypothetical protein
sw_12_scaffold_153_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13509..14615)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI000378E968
Uncharacterized protein {ECO:0000313|EMBL:EFW93436.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_153_16

Not on your lists

14837..16612
DNA (1776bp) protein (592aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=756883 species="Archaea.;" source="halo
Dihydroxy-acid dehydratase n=1 Tax=halophilic archaeon DL31 RepID=G2MKR3_9ARCH
sw_12_scaffold_153_17
unknown

Not on your lists

comp(16867..17127)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_12_scaffold_153_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17225..17902)
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_12_scaffold_153_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18028..18777
DNA (750bp) protein (250aa)
hypothetical protein id=24646583 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_153_trna_1
unknown

Not on your lists

comp(19182..19254)
DNA (73bp)
transferRNA
sw_12_scaffold_153_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19428..19814
DNA (387bp) protein (129aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBL8_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA55261.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sw_12_scaffold_153_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20166..20363
DNA (198bp) protein (66aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1I9_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA51736.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mechanosensitive ion channel protein MscS
sw_12_scaffold_153_22
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20458..21534)
DNA (1077bp) protein (359aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BDV3_9EURY
rRNA pseudouridine synthase, putative
sw_12_scaffold_153_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21609..22184)
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk2; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
sw_12_scaffold_153_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22307..23275)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_153_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23394..24044)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
sw_12_scaffold_153_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24280..25299
DNA (1020bp) protein (340aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR1_9EURY
sw_12_scaffold_153_27
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25485..26597
DNA (1113bp) protein (371aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDH2_9EURY
Histidine kinase {ECO:0000313|EMBL:AHG04933.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
integral membrane sensor signal transduction histidine kinase
sw_12_scaffold_153_28
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26594..27076
DNA (483bp) protein (161aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAP14614.2}; EC=2.7.13.3 {ECO:0000313|EMBL:CAP14614.2};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
Sensor box histidine kinase n=2 Tax=Halobacterium salinarum RepID=B0R795_HALS3
signal-transducing histidine kinase
sw_12_scaffold_153_29
unknown

Not on your lists

comp(27010..27168)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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