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sw_12_scaffold_182

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_182_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(43..198)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4U4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23743.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_182_2
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(389..1315)
DNA (927bp) protein (309aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Salisaeta longa RepID=UPI0003B519C1
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
nucleoside-diphosphate-sugar epimerase
sw_12_scaffold_182_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1840..2259)
DNA (420bp) protein (140aa)
hypothetical protein
hypothetical protein id=24657514 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45647.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_182_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2375..2743)
DNA (369bp) protein (123aa)
chorismate mutase
chorismate mutase id=24657513 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative chorismate mutase {ECO:0000313|EMBL:ABC44535.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_12_scaffold_182_5
GWA2_CPR1_42_17, CPR1, Bacteria

Not on your lists

comp(3107..4105)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI000364FAD3
NAD-dependent epimerase/dehydratase Tax=GWA2_CPR1_42_17
NAD-dependent epimerase/dehydratase
sw_12_scaffold_182_6
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4125..4958)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B58BB8
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBN56734.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;
glycosyl transferase family 2
sw_12_scaffold_182_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4992..6239)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K196_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63861.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
sw_12_scaffold_182_8
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

comp(6239..7144)
DNA (906bp) protein (302aa)
GT1_YagM_like family glycosyltransferase n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D572_9BACT
GT1_YagM_like family glycosyltransferase {ECO:0000313|EMBL:ERP31093.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" sour
group 1 glycosyl transferase
sw_12_scaffold_182_9
Aminicenantes bacterium SCGC AAA252-K06, Aminicenantes, Bacteria

Not on your lists

7399..8289
DNA (891bp) protein (297aa)
hypothetical protein, partial n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B61D4B
sw_12_scaffold_182_10
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8349..9146)
DNA (798bp) protein (266aa)
Sulfotransferase domain protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VXZ7_9CYAN
Sulfotransferase domain protein {ECO:0000313|EMBL:ESA32696.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Is
sulfotransferase family protein
sw_12_scaffold_182_11
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(9265..10617)
DNA (1353bp) protein (451aa)
Polysaccharide biosynthesis protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQY4_MARHT
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEB12562.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrot
sw_12_scaffold_182_12
unknown

Not on your lists

comp(10663..11871)
DNA (1209bp) protein (403aa)

This feature has no annotations

sw_12_scaffold_182_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11903..13138)
DNA (1236bp) protein (412aa)
Chain length determinant protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Z4_SALRD
chain length determinant protein
Chain length determinant protein {ECO:0000313|EMBL:ABC45730.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_12_scaffold_182_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13401..15398)
DNA (1998bp) protein (666aa)
mutL; DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL id=24659673 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
mutL; DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
sw_12_scaffold_182_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15420..15620)
DNA (201bp) protein (67aa)
hypothetical protein
hypothetical protein id=24659674 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45955.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_182_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15872..16741)
DNA (870bp) protein (290aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ABC46108.1}; EC=2.7.7.41 {ECO:0000313|EMBL:ABC46108.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Phosphatidate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1U8_SALRD
cdsA; phosphatidate cytidylyltransferase
sw_12_scaffold_182_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16738..17109)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24842.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_182_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17153..18142)
DNA (990bp) protein (330aa)
hypothetical protein id=24659677 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABC46070.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_12_scaffold_182_trna_1
unknown

Not on your lists

18308..18381
DNA (74bp)
transferRNA
sw_12_scaffold_182_19
unknown

Not on your lists

18483..19223
DNA (741bp) protein (247aa)

This feature has no annotations

sw_12_scaffold_182_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19289..20389)
DNA (1101bp) protein (367aa)
Glycosyl transferase group 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N638_9EURY
Glycosyl transferase group 1 {ECO:0000313|EMBL:EMA53346.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
glycosyl transferase group 1
sw_12_scaffold_182_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20425..20793)
DNA (369bp) protein (123aa)
Putative 6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:CBH24629.1}; EC=4.2.3.12 {ECO:0000313|EMBL:CBH24629.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Putative 6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C4_SALRM
ygcM; 6-pyruvoyl tetrahydrobiopterin synthase
sw_12_scaffold_182_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20832..21878)
DNA (1047bp) protein (349aa)
Putative zinc-binding dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C5_SALRM
zinc-binding dehydrogenase
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CBH24630.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_182_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21934..23298)
DNA (1365bp) protein (455aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
Riboflavin-specific deaminase/GTP cyclohydrolase II n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C6_SALRM
riboflavin-specific deaminase/GTP cyclohydrolase II
sw_12_scaffold_182_24
Spirosoma panaciterrae, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23751..24146)
DNA (396bp) protein (132aa)
glyoxalase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A33C2
Displaying 25 items

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