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sw_12_scaffold_1858

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1858_1
unknown

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92..259
DNA (168bp) protein (56aa)

This feature has no annotations

sw_12_scaffold_1858_2
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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352..693
DNA (342bp) protein (114aa)
Glutaredoxin-like protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AA23_9EURY
Glutaredoxin-like protein {ECO:0000313|EMBL:ELY94178.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 109
glutaredoxin-like protein
sw_12_scaffold_1858_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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775..1152
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D007_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELZ28836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
endoribonuclease L-PSP
sw_12_scaffold_1858_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1180..1353
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2B2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28837.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_12_scaffold_1858_trna_1
unknown

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1382..1463
DNA (82bp)
transferRNA
sw_12_scaffold_1858_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1694..2692)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ55_HALUD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV11799.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_1858_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3274..4464)
DNA (1191bp) protein (397aa)
Sugar transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1U9_9EURY
Sugar transporter {ECO:0000313|EMBL:ELZ28838.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
major facilitator superfamily protein
sw_12_scaffold_1858_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4824..5225
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D084_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28875.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_1858_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5486..6949
DNA (1464bp) protein (488aa)
Thermosome n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D040_9EURY
Thermosome {ECO:0000313|EMBL:ELZ28876.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
thermosome
sw_12_scaffold_1858_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7374..7829)
DNA (456bp) protein (152aa)
Neutral proteinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGB4_9EURY
transposase (IS891/IS1136/IS1341/IS605)
Neutral proteinase {ECO:0000313|EMBL:ERJ05386.1}; Transposase (IS891/IS1136/IS1341/IS605) {ECO:0000313|EMBL:CCQ33142.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_12_scaffold_1858_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7924..8124)
DNA (201bp) protein (67aa)
insertion element protein (ISH2) id=24631888 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
CopG family ribbon-helix-helix protein {ECO:0000313|EMBL:ERG93639.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
insertion element protein (ISH2)
sw_12_scaffold_1858_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8285..8755)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KC34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA18771.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_12_scaffold_1858_12
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8775..9434)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBK3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA18772.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_12_scaffold_1858_13
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9536..9973)
DNA (438bp) protein (146aa)
Neutral proteinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGB4_9EURY
IS1341-type transposase {ECO:0000313|EMBL:AKH97892.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
transposase (IS891/IS1136/IS1341/IS605)
sw_12_scaffold_1858_14
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10175..10408)
DNA (234bp) protein (78aa)
Neutral proteinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGB4_9EURY
transposase (IS891/IS1136/IS1341/IS605)
IS1341-type transposase {ECO:0000313|EMBL:AKH98340.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
sw_12_scaffold_1858_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10583..11041)
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=3 Tax=Haloarcula RepID=G0HQ98_HALHT
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMA09384.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula val
sw_12_scaffold_1858_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11169..11306
DNA (138bp) protein (46aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosi
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3X4_9EURY
Displaying 17 items

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