ggKbase home page

sw_12_scaffold_226

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_226_1
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17..193)
DNA (177bp) protein (59aa)
Transposase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGP1_NATGS
transposase
Transposase {ECO:0000313|EMBL:AFZ72981.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (strain ATCC 4
sw_12_scaffold_226_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(239..1000)
DNA (762bp) protein (254aa)
alcohol dehydrogenase zinc-binding domain-containing protein id=24616266 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Alcohol dehydrogenase zinc-binding domain-containing protein {ECO:0000313|EMBL:ESP87763.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus H
alcohol dehydrogenase GroES domain protein
sw_12_scaffold_226_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1029..1307)
DNA (279bp) protein (93aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X4R8_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ELY56451.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococc
Zn-dependent alcohol dehydrogenase
sw_12_scaffold_226_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1415..3007)
DNA (1593bp) protein (531aa)
Replication factor C large subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3D1_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256
ATPase AAA
sw_12_scaffold_226_5
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3426..4022
DNA (597bp) protein (199aa)
GCN5-related N-acetyltransferase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LPZ4_HALLT
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACM57432.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofund
sw_12_scaffold_226_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4233..5798)
DNA (1566bp) protein (522aa)
Polysaccharide biosynthesis protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NH27_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA56414.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
membrane protein involved in the export of O-antigen and teichoic acid
sw_12_scaffold_226_7
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6205..7266
DNA (1062bp) protein (354aa)
SAM-dependent methyltransferase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WCC0_9EURY
SAM-dependent methyltransferase {ECO:0000313|EMBL:ELY47099.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
SAM-dependent methyltransferase
sw_12_scaffold_226_8
unknown

Not on your lists

7447..7656
DNA (210bp) protein (70aa)

This feature has no annotations

sw_12_scaffold_226_9
unknown

Not on your lists

7643..7840
DNA (198bp) protein (66aa)

This feature has no annotations

sw_12_scaffold_226_10
unknown

Not on your lists

7950..8681
DNA (732bp) protein (244aa)

This feature has no annotations

sw_12_scaffold_226_11
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8708..9277)
DNA (570bp) protein (190aa)
GNAT family acetyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAE8_9EURY
GNAT family acetyltransferase {ECO:0000313|EMBL:ELZ80702.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 3
GNAT family acetyltransferase
sw_12_scaffold_226_12
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9414..9914
DNA (501bp) protein (167aa)
Transcriptional regulator, AsnC family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRR3_HALUD
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV13018.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_12_scaffold_226_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10054..11193
DNA (1140bp) protein (380aa)
aspC2; pyridoxal phosphate-dependent aminotransferase (EC:2.6.1.-)
Class I and II aminotransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQT6_HALMO
Class I and II aminotransferase {ECO:0000313|EMBL:EMA47713.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
sw_12_scaffold_226_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11419..13854
DNA (2436bp) protein (812aa)
ATPase, type iv secretory pathway virb11 component like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CSP8_9EURY
ATPase, type iv secretory pathway virb11 component like protein {ECO:0000313|EMBL:ELZ26290.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometric
type II secretion system protein E
sw_12_scaffold_226_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13851..15878
DNA (2028bp) protein (676aa)
Transmembrane protein (Type II secretion system proteins TadC) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMW0_9EURY
Transmembrane protein (Type II secretion system proteins TadC) {ECO:0000313|EMBL:EMA46991.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
transmembrane protein (type II secretion system proteins TadC)
sw_12_scaffold_226_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15894..16313
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTS7_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10916.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_226_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16315..16893
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4A1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60268.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_226_18
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16881..17309
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3S1_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK18881.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_12_scaffold_226_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17306..17782
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGP2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN60266.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_12_scaffold_226_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17775..18665
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037A9A34
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48249.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_226_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18666..20156)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60264.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_226_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20273..20464
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49439.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_226_23
unknown

Not on your lists

20608..20775
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 23 items

View Taxonomy