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sw_12_scaffold_260

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_260_1

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comp(68..1246)
DNA (1179bp) protein (393aa)
dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:AEN04817.1}; EC=1.8.1.4 {ECO:0000313|EMBL:AEN04817.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Dihydrolipoyl dehydrogenase n=1 Tax=halophilic archaeon DL31 RepID=G2MIN6_9ARCH
sw_12_scaffold_260_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1440..2912
DNA (1473bp) protein (491aa)
Ferredoxin-NAD+ reductase 1 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N072_HALMO
Ferredoxin-NAD+ reductase 1 {ECO:0000313|EMBL:EMA51392.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
flavin-dependent pyridine nucleotide oxidoreductase (homolog to coenzyme A disulfide reductase)
sw_12_scaffold_260_3
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2973..4826
DNA (1854bp) protein (618aa)
Glycoside hydrolase 15-like protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTJ4_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELY40312.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
glycoside hydrolase 15-like protein
sw_12_scaffold_260_4
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4932..5456
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JVI5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36290.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_260_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5586..6374)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89668.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
NAD-dependent epimerase/dehydratase
sw_12_scaffold_260_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6468..7892)
DNA (1425bp) protein (475aa)
dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4II61_9EURY
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:AHG03089.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
sw_12_scaffold_260_7
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7941..8654)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9P7_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA05256.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_12_scaffold_260_8
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8668..8784)
DNA (117bp) protein (39aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LMF8_HALLT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACM56546.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
sw_12_scaffold_260_9

Not on your lists

comp(8781..9134)
DNA (354bp) protein (118aa)
CoA-disulfide reductase (EC:1.8.1.14)
CoA-disulfide reductase {ECO:0000313|EMBL:AEN05876.1}; EC=1.8.1.14 {ECO:0000313|EMBL:AEN05876.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNN9_9EURY
sw_12_scaffold_260_10

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comp(9135..10082)
DNA (948bp) protein (316aa)
CoA-disulfide reductase (EC:1.8.1.14)
CoA-disulfide reductase {ECO:0000313|EMBL:AEN05876.1}; EC=1.8.1.14 {ECO:0000313|EMBL:AEN05876.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNN9_9EURY
sw_12_scaffold_260_11

Not on your lists

comp(10224..11606)
DNA (1383bp) protein (461aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Dihydrolipoyl dehydrogenase n=2 Tax=Archaea RepID=B9LWE8_HALLT
sw_12_scaffold_260_12
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11620..12435)
DNA (816bp) protein (272aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P767_9EURY
Mercuric reductase {ECO:0000313|EMBL:EMA65384.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
sw_12_scaffold_260_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12471..13115)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JCV0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN56931.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
mercuric reductase
sw_12_scaffold_260_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13205..13558
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD23_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ21145.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
ArsR family transcriptional regulator
sw_12_scaffold_260_15
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14007..14426)
DNA (420bp) protein (140aa)
ISH9-type transposase ISHwa3 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XMS1_9EURY
ISH9-type transposase ISHwa3 {ECO:0000313|EMBL:ELY63015.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DS
transposase, IS5 family
sw_12_scaffold_260_16
unknown

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comp(14529..14720)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_12_scaffold_260_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14838..15065)
DNA (228bp) protein (76aa)
SWIM zinc finger domain protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W1_9EURY
SWIM zinc finger domain protein {ECO:0000313|EMBL:EMA41451.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
zinc finger SWIM domain protein
sw_12_scaffold_260_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15288..15584
DNA (297bp) protein (99aa)
HTH domain-containing protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSB6_HALBP
hth domain-containing protein
HTH domain-containing protein {ECO:0000313|EMBL:ADQ66905.1}; Hth domain-containing protein {ECO:0000313|EMBL:ELY30412.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
sw_12_scaffold_260_19
unknown

Not on your lists

15581..15790
DNA (210bp) protein (70aa)

This feature has no annotations

sw_12_scaffold_260_20
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15787..16617
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RRB2_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60472.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_12_scaffold_260_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16720..16908
DNA (189bp) protein (63aa)
Transposase, IS605 OrfB family protein (Fragment) n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MP78_HALMO
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA47173.1}; Flags: Fragment;; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
sw_12_scaffold_260_22
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16978..17499)
DNA (522bp) protein (174aa)
Zinc finger SWIM domain protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E8U5_9EURY
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ELZ44190.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM
SWIM zinc finger-containing protein
sw_12_scaffold_260_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17688..18050
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91146.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_260_24
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17995..18426
DNA (432bp) protein (144aa)
PilT protein domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S2J6_HALTV
twitching mobility protein PilT
PilT protein domain protein {ECO:0000313|EMBL:ADB63593.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (s
sw_12_scaffold_260_25
unknown

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19032..19274
DNA (243bp) protein (81aa)

This feature has no annotations

sw_12_scaffold_260_26
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19443..20330
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W0F7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY42935.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_12_scaffold_260_27
unknown

Not on your lists

comp(20220..20483)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 27 items

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