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sw_12_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_282_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CSM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26211.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_12_scaffold_282_2
unknown

Not on your lists

416..583
DNA (168bp) protein (56aa)

This feature has no annotations

sw_12_scaffold_282_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(628..1851)
DNA (1224bp) protein (408aa)
ABC transporter-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M543_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:EMA39754.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
ABC transporter-like protein
sw_12_scaffold_282_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1919..2440)
DNA (522bp) protein (174aa)
ABC transporter-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M543_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:EMA39754.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
ABC transporter
sw_12_scaffold_282_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2504..3187)
DNA (684bp) protein (228aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formyl
purQ; phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8K5_9EURY
sw_12_scaffold_282_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3184..3459)
DNA (276bp) protein (92aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LD83_9EURY
phosphoribosylformylglycinamidine synthase PurS
sw_12_scaffold_282_7
unknown

Not on your lists

comp(3548..3835)
DNA (288bp) protein (96aa)

This feature has no annotations

sw_12_scaffold_282_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3780..5114)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_282_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5261..5611)
DNA (351bp) protein (117aa)
50S ribosomal protein L12 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND97_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rpl12p; 50S ribosomal protein L12P
sw_12_scaffold_282_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5656..6690)
DNA (1035bp) protein (345aa)
50S ribosomal protein L10 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQX1_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
ribosomal protein L10
sw_12_scaffold_282_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6690..7328)
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHL1_9EURY
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rpl1P; 50S ribosomal protein L1
sw_12_scaffold_282_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7520..8212
DNA (693bp) protein (231aa)
Haloacid dehalogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLG0_HALBP
haloacid dehalogenase
Haloacid dehalogenase {ECO:0000313|EMBL:ELY27448.1}; Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:ADQ66056.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; H
sw_12_scaffold_282_13
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8312..8806)
DNA (495bp) protein (165aa)
50S ribosomal protein L11 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R886_HALMT
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (str
sw_12_scaffold_282_14
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8915..10252)
DNA (1338bp) protein (446aa)
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6R4_9EURY
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ELY57474.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
sw_12_scaffold_282_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10542..12551)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P430_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47852.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_282_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12667..14304)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26925.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PKD domain-containing protein
sw_12_scaffold_282_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15717..16301)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7G7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27905.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_12_scaffold_282_18
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16371..17198)
DNA (828bp) protein (276aa)
TatD-related deoxyribonuclease n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MAQ4_9EURY
TatD-related deoxyribonuclease {ECO:0000313|EMBL:EMA41709.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireduce
putative metal-dependent hydrolase
sw_12_scaffold_282_19
unknown

Not on your lists

comp(17140..17718)
DNA (579bp) protein (193aa)

This feature has no annotations

sw_12_scaffold_282_20
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17773..18273)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=Q9HPJ5_HALSA
Uncharacterized protein {ECO:0000313|EMBL:KDE59571.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_12_scaffold_282_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18441..20186
DNA (1746bp) protein (582aa)
Na+ antiporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4U2_9EURY
Na+ antiporter {ECO:0000313|EMBL:EMA52901.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;
na+ antiporter
sw_12_scaffold_282_22
unknown

Not on your lists

comp(20013..20354)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_12_scaffold_282_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20463..21446)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49544.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_282_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21443..24622)
DNA (3180bp) protein (1060aa)
Transmembrane oligosaccharyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ08_9EURY
Transmembrane oligosaccharyl transferase {ECO:0000313|EMBL:EMA44719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
tot; transmembrane oligosaccharyl transferase
sw_12_scaffold_282_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24743..25711
DNA (969bp) protein (323aa)
Succinoglycan biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKY9_9EURY
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:EMA45095.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
family 2 glycosyl transferase
sw_12_scaffold_282_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25716..26816
DNA (1101bp) protein (367aa)
Group 1 glycosyl transferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MUZ5_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:EMA49547.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
group 1 glycosyl transferase
sw_12_scaffold_282_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26870..28426
DNA (1557bp) protein (519aa)
Polysaccharide biosynthesis protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J598_HALJB
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADJ13679.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
sw_12_scaffold_282_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28545..29660
DNA (1116bp) protein (372aa)
Family 2 glycosyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKZ8_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:EMA45105.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
family 2 glycosyl transferase
sw_12_scaffold_282_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29657..29983)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N796_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52525.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_282_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30222..30431
DNA (210bp) protein (70aa)
Putative CopG family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4N4_HALJB
putative CopG family transcriptional regulator
Putative CopG family transcriptional regulator {ECO:0000313|EMBL:ELY36090.1}; Putative transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ADJ15501.1}; TaxID=795797 species="Archaea; Eury
Displaying items 1-30 of 31 in total

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