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sw_12_scaffold_290

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_290_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..546
DNA (546bp) protein (182aa)
ORC1-type DNA replication protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JVV2_HALVA
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula val
orc1/cdc6 family replication initiation protein
sw_12_scaffold_290_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

750..962
DNA (213bp) protein (71aa)
Uncharacterized protein id=24625458 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG97639.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
sw_12_scaffold_290_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1161..1361)
DNA (201bp) protein (67aa)
DNA polymerase I {ECO:0000313|EMBL:EMA11789.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EMA11789.1};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
polB2; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JUY9_HALVA
sw_12_scaffold_290_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1675..2010)
DNA (336bp) protein (112aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N8U5_9EURY
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ERG92938.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadra
hypothetical protein
sw_12_scaffold_290_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2526..2699)
DNA (174bp) protein (58aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:ELZ26415.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Hal
sw_12_scaffold_290_6
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2798..3079
DNA (282bp) protein (94aa)
Phosphocarrier protein HPr n=5 Tax=Haloferax RepID=D4GUP8_HALVD
ptsH3; phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:ADE04358.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATC
sw_12_scaffold_290_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3081..3536)
DNA (456bp) protein (152aa)
PTS system, galactitol-specific enzyme II, A component (EC:2.7.1.69)
PTS system, galactitol-specific enzyme II, A component n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUP9_HALVD
PTS system galactitol-specific transporter subunit IIA {ECO:0000313|EMBL:CQR48679.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
sw_12_scaffold_290_8
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3711..4136
DNA (426bp) protein (142aa)
UPF0047 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ4_HALVD
hypothetical protein
UPF0047 family protein {ECO:0000313|EMBL:ADE04950.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY33699.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
sw_12_scaffold_290_9
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4203..4994
DNA (792bp) protein (264aa)
Fructose-1,6-bisphosphate aldolase of the DhnA family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G4B8_9EURY
Fructose-1,6-bisphosphate aldolase of the DhnA family protein {ECO:0000313|EMBL:ELZ65649.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
fbaB; fructose-1,6-bisphosphate aldolase of the DhnA family
sw_12_scaffold_290_10
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5062..5760
DNA (699bp) protein (233aa)
Triosephosphate isomerase {ECO:0000313|EMBL:ELZ79982.1}; EC=5.3.1.1 {ECO:0000313|EMBL:ELZ79982.1};; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
tpiA2; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8C8_9EURY
sw_12_scaffold_290_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5903..6454
DNA (552bp) protein (184aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKL2_NATM8
IS240-type transposase
ISH14-type transposase ISNamo12 {ECO:0000313|EMBL:CCQ36099.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
sw_12_scaffold_290_12
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6514..6816
DNA (303bp) protein (101aa)
Presumptive arabitol PTS enzyme IIB n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G283_9EURY
Presumptive arabitol PTS enzyme IIB {ECO:0000313|EMBL:ELZ65647.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
presumptive arabitol PTS enzyme IIB
sw_12_scaffold_290_13
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7098..8636
DNA (1539bp) protein (513aa)
Phosphotransferase system component IIC n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ0_HALVD
PTS system, galactitol-specific enzyme II, C component
Galactitol permease IIC component {ECO:0000313|EMBL:CQR48678.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
sw_12_scaffold_290_14
unknown

Not on your lists

comp(8780..9376)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_12_scaffold_290_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9489..9746
DNA (258bp) protein (86aa)
speD_1; agmatinase 1 (EC:3.5.3.11)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L880_9EURY
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:EMA28130.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisa
sw_12_scaffold_290_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9923..11494)
DNA (1572bp) protein (524aa)
Choline-sulfatase n=2 Tax=Halococcus hamelinensis RepID=M0LUE0_9EURY
Choline-sulfatase {ECO:0000313|EMBL:EMA37187.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
sw_12_scaffold_290_17
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11743..12717
DNA (975bp) protein (325aa)
Fumarylacetoacetate hydrolase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B4W8_NATA1
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ELZ04694.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATC
fumarylacetoacetate hydrolase
sw_12_scaffold_290_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12763..13638)
DNA (876bp) protein (292aa)
Alcohol dehydrogenase, class IV n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L0E1_HALJP
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA26996.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
alcohol dehydrogenase
sw_12_scaffold_290_19
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14265..15035)
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPQ3_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY38962.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
hypothetical protein
sw_12_scaffold_290_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15383..16366
DNA (984bp) protein (328aa)
ABC transporter substrate-binding protein
gloA; Lactoylglutathione lyase; K15975 glyoxalase family protein id=24658817 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ABC44718.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
sw_12_scaffold_290_21
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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16494..17510
DNA (1017bp) protein (339aa)
Extra-cytoplasmic solute receptor n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AEE3_9EURY
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:ELY96247.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DS
hypothetical protein
sw_12_scaffold_290_22
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17541..18083
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI00037354AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01269.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_12_scaffold_290_23
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18080..19582
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AEB2_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97070.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_12_scaffold_290_24
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20427..21269)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E9L0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43084.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_12_scaffold_290_25
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21341..22012
DNA (672bp) protein (224aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7V7_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELZ43083.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="
Bacterio-opsin activator HTH domain-containing protein
sw_12_scaffold_290_26
unknown

Not on your lists

22309..22410
DNA (102bp) protein (34aa)

This feature has no annotations

sw_12_scaffold_290_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23052..24425
DNA (1374bp) protein (458aa)
ORC1-type DNA replication protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ILY5_NATPD
cdc6_5; cell division control protein cdc6-like protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_12_scaffold_290_28
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24714..24983)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JRL6_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA11792.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_290_29
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25196..25294
DNA (99bp) protein (33aa)
CopG family transcripitonal regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator id=24622029 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp.
CopG family transcripitonal regulator
Displaying 29 items

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