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sw_12_scaffold_301

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_301_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..318
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21084.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_12_scaffold_301_2
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

511..1464
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZWK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80270.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_12_scaffold_301_3
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1474..2343
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L598_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28278.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_301_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2362..3891)
DNA (1530bp) protein (510aa)
TROVE domain-containing protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K228_9EURY
TROVE domain-containing protein {ECO:0000313|EMBL:EMA14843.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californi
TROVE domain-containing protein
sw_12_scaffold_301_5
unknown

Not on your lists

comp(3896..4462)
DNA (567bp) protein (189aa)

This feature has no annotations

sw_12_scaffold_301_trna_11
unknown

Not on your lists

comp(3953..4027)
DNA (75bp)
transferRNA
sw_12_scaffold_301_trna_10
unknown

Not on your lists

comp(4716..4788)
DNA (73bp)
transferRNA
sw_12_scaffold_301_trna_9
unknown

Not on your lists

comp(4948..5023)
DNA (76bp)
transferRNA
sw_12_scaffold_301_trna_8
unknown

Not on your lists

comp(5231..5306)
DNA (76bp)
transferRNA
sw_12_scaffold_301_trna_7
unknown

Not on your lists

comp(5343..5413)
DNA (71bp)
transferRNA
sw_12_scaffold_301_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5558..5962)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K083_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14842.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_12_scaffold_301_trna_6
unknown

Not on your lists

comp(5979..6051)
DNA (73bp)
transferRNA
sw_12_scaffold_301_trna_5
unknown

Not on your lists

comp(6103..6175)
DNA (73bp)
transferRNA
sw_12_scaffold_301_trna_4
unknown

Not on your lists

comp(6255..6327)
DNA (73bp)
transferRNA
sw_12_scaffold_301_trna_3
unknown

Not on your lists

comp(6389..6463)
DNA (75bp)
transferRNA
sw_12_scaffold_301_trna_2
unknown

Not on your lists

comp(6890..6962)
DNA (73bp)
transferRNA
sw_12_scaffold_301_trna_1
unknown

Not on your lists

comp(7233..7306)
DNA (74bp)
transferRNA
sw_12_scaffold_301_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8042..8623
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3F1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15962.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_12_scaffold_301_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8642..8752
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K437_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15961.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_12_scaffold_301_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8842..9246)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P7T9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66227.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
putative transcriptional regulator
sw_12_scaffold_301_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9270..9575)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R8F0_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP12922.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
sw_12_scaffold_301_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10032..11162)
DNA (1131bp) protein (377aa)
IS1341-type transposase (TCE31) n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KEU9_9EURY
IS1341-type transposase (TCE31) {ECO:0000313|EMBL:EMA19368.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
IS1341-type transposase (TCE31)
sw_12_scaffold_301_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11189..11578)
DNA (390bp) protein (130aa)
IS200-type transposase (TCE31) n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E5N3_9EURY
IS200-type transposase (TCE31) {ECO:0000313|EMBL:EMA31604.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
IS200-type transposase (TCE31)
sw_12_scaffold_301_13
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11973..12296
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MLH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46496.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_12_scaffold_301_14
unknown

Not on your lists

12299..12439
DNA (141bp) protein (47aa)

This feature has no annotations

sw_12_scaffold_301_15
unknown

Not on your lists

comp(12477..12794)
DNA (318bp) protein (106aa)

This feature has no annotations

sw_12_scaffold_301_16
unknown

Not on your lists

comp(12889..13335)
DNA (447bp) protein (149aa)

This feature has no annotations

sw_12_scaffold_301_17
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13332..13694)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XN35_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY63209.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
putative DNA binding protein
Displaying 28 items

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