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sw_12_scaffold_328

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_328_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_12_scaffold_328_2
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(382..942)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQS7_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE01886.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_12_scaffold_328_3
unknown

Not on your lists

comp(1523..1642)
DNA (120bp) protein (40aa)

This feature has no annotations

sw_12_scaffold_328_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2149..2937
DNA (789bp) protein (263aa)
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDF8_HALXS
Hydroxypyruvate isomerase {ECO:0000313|EMBL:KDE58692.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_12_scaffold_328_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3071..4081)
DNA (1011bp) protein (337aa)
Amidohydrolase 2 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7E2_HALJP
Amidohydrolase 2 {ECO:0000313|EMBL:EMA28394.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
amidohydrolase 2
sw_12_scaffold_328_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4542..5411)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5M9_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28393.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_328_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5415..5924)
DNA (510bp) protein (170aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L485_HALJP
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA28392.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcul
hypothetical protein
sw_12_scaffold_328_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5924..6184)
DNA (261bp) protein (87aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L485_HALJP
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA28392.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcul
sw_12_scaffold_328_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6181..7026)
DNA (846bp) protein (282aa)
Taurine-transporting AtPase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B4_HALJP
Taurine-transporting AtPase {ECO:0000313|EMBL:EMA28391.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
hypothetical protein
sw_12_scaffold_328_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7159..8427)
DNA (1269bp) protein (423aa)
NMT1/THI5 like domain-containing protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8W7_HALJP
hypothetical protein
NMT1/THI5 like domain-containing protein {ECO:0000313|EMBL:EMA28390.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_12_scaffold_328_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8725..9873)
DNA (1149bp) protein (383aa)
Oxidoreductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L480_HALJP
Oxidoreductase {ECO:0000313|EMBL:EMA28387.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
oxidoreductase
sw_12_scaffold_328_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10052..11164
DNA (1113bp) protein (371aa)
NADH-dependent dehydrogenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5M2_HALJP
NADH-dependent dehydrogenase {ECO:0000313|EMBL:EMA28388.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
hypothetical protein
sw_12_scaffold_328_13
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11723..13081)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9F1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01385.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_12_scaffold_328_14
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13215..14057
DNA (843bp) protein (281aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDA9_9EURY
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:KDE58813.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagn
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
sw_12_scaffold_328_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14188..15636
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28386.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_12_scaffold_328_16
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15944..16714
DNA (771bp) protein (257aa)
IclR family transcriptional regulator n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1U0_NATMM
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY26585.1}; Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADD07549.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; N
sw_12_scaffold_328_17
unknown

Not on your lists

comp(16744..16890)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_12_scaffold_328_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17381..18802
DNA (1422bp) protein (474aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M107_9EURY
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:EMA38045.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
Chromosome segregation protein (Spc25, Csm1, Pcs1)
sw_12_scaffold_328_19
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19235..20002)
DNA (768bp) protein (256aa)
Transcriptional regulator, IclR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F6_HALTV
IclR family transcriptional regulator {ECO:0000313|EMBL:KDE60557.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola
IclR family transcriptional regulator
sw_12_scaffold_328_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20720..20830)
DNA (111bp) protein (37aa)
Transposase IS4 family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MT89_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA48538.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
tnp; transposase
Displaying 20 items

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