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sw_12_scaffold_344

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_344_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..511)
DNA (510bp) protein (170aa)
cirA; TonB-dependent receptor id=24658790 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABC45727.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
sw_12_scaffold_344_2
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1264..1965
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000346FFEB
TRAP dicarboxylate transporter subunit DctP
Tax=BJP_IG2102_Ignavibacteriales_35_8
sw_12_scaffold_344_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2020..2559
DNA (540bp) protein (180aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK8_RHOMR
Tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:AEN74176.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sw_12_scaffold_344_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2612..3907
DNA (1296bp) protein (432aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK7_RHOMR
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEN74175.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
sw_12_scaffold_344_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4110..5684
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIV7_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48415.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_12_scaffold_344_6
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

5710..6321
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI00030D415A
glycoside hydrolase family 31 Tax=GWF2_Planctomycetes_42_9_curated
glycoside hydrolase family 31
sw_12_scaffold_344_7
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6411..7199
DNA (789bp) protein (263aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF68_9BACT
short-chain dehydrogenase/reductase SDR
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDY83542.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrob
sw_12_scaffold_344_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7267..8376
DNA (1110bp) protein (370aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
Mannonate dehydratase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K4C1_CLOPA
Mannonate dehydratase
sw_12_scaffold_344_9
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8417..9094
DNA (678bp) protein (226aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZU71_MELRP
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:AFN75559.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Meliori
sw_12_scaffold_344_10
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9165..10193
DNA (1029bp) protein (343aa)
PfkB domain protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YVL5_MELRP
PfkB domain protein
PfkB domain protein {ECO:0000313|EMBL:AFN74607.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseu
sw_12_scaffold_344_11
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10654..11460)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036B85BB
Membrane metalloprotease {ECO:0000313|EMBL:ELR68088.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Membrane metalloprotease
sw_12_scaffold_344_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11726..11980)
DNA (255bp) protein (85aa)
hypothetical protein
hypothetical protein id=24657354 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45274.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_344_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12344..13132)
DNA (789bp) protein (263aa)
Putative RNA methyltransferase n=2 Tax=Salinibacter ruber RepID=Q2S583_SALRD
spoU; RNA methyltransferase
Putative RNA methyltransferase {ECO:0000313|EMBL:ABC45823.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_12_scaffold_344_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13478..15520
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S581_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45011.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_344_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15684..17300
DNA (1617bp) protein (539aa)
Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Nicotinamide nucleotide repair protein; Includes:; ADP-dependent (S)-NAD(P)H-hydrate dehydratase; EC=4.2.1.136;; ADP-dependent NAD(P)HX dehydratase; Inc
Bifunctional NAD(P)H-hydrate repair enzyme Nnr n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=NNR_SALRD
sugar kinase
sw_12_scaffold_344_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17404..17802
DNA (399bp) protein (133aa)
hypothetical protein
hypothetical protein id=24657359 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23510.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_344_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18057..18938
DNA (882bp) protein (294aa)
tonB; TonB protein; K03832 periplasmic protein TonB id=24657360 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tonB; TonB protein
TonB protein {ECO:0000313|EMBL:CBH23511.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
sw_12_scaffold_344_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18920..19615)
DNA (696bp) protein (232aa)
rpiA; ribose 5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] id=24657361 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
rpiA; ribose 5-phosphate isomerase A
sw_12_scaffold_344_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19822..19980)
DNA (159bp) protein (53aa)
hypothetical protein
hypothetical protein id=24657362 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43950.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 19 items

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