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sw_12_scaffold_390

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_390_1
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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2..208
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3BBE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB12765.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (st
sw_12_scaffold_390_2
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(262..1155)
DNA (894bp) protein (298aa)
Putative lipoprotein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PFB7_CELJU
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ACE85793.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (
sw_12_scaffold_390_3

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1373..2167
DNA (795bp) protein (265aa)
Transposase family protein n=15 Tax=Singulisphaera acidiphila RepID=H1MQB9_SINAD
Uncharacterized protein {ECO:0000313|EMBL:KKL86976.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase family protein
sw_12_scaffold_390_4

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2193..2363
DNA (171bp) protein (57aa)
Putative transposase for insertion sequence element n=1 Tax=Thauera sp. 28 RepID=N6YDE2_9RHOO
Marine sediment metagenome DNA, contig: S01H1_L01795 {ECO:0000313|EMBL:GAF84763.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative transposase for insertion sequence element
sw_12_scaffold_390_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2715..4142
DNA (1428bp) protein (476aa)
Sulfatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGT6_9BACT
Sulfatase {ECO:0000313|EMBL:EEF60857.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
sulfatase
sw_12_scaffold_390_6

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4155..5888
DNA (1734bp) protein (578aa)
arylsulfatase (EC:3.1.6.1)
Sulfatase n=1 Tax=uncultured organism RepID=T1W787_9ZZZZ
Sulfatase {ECO:0000313|EMBL:AGU10872.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sw_12_scaffold_390_7
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6144..6536
DNA (393bp) protein (131aa)
transposase IS4 family protein id=24657485 bin=Salinibacter_ruber species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=Salinibacter_ruber
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADE15906.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus h
sw_12_scaffold_390_8

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6533..7201
DNA (669bp) protein (223aa)
Phospholipase D (Fragment) n=1 Tax=uncultured archaeon A07HR60 RepID=V4YK29_9ARCH
Phospholipase D {ECO:0000313|EMBL:ESS11807.1}; Flags: Fragment;; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
tyrosyl-DNA phosphodiesterase
sw_12_scaffold_390_9
unknown

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7299..7835
DNA (537bp) protein (179aa)

This feature has no annotations

sw_12_scaffold_390_10
unknown

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7976..8263
DNA (288bp) protein (96aa)

This feature has no annotations

sw_12_scaffold_390_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8669..9088)
DNA (420bp) protein (140aa)
Fibronectin, type III n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F2_SALRM
Fibronectin, type III
Fibronectin, type III {ECO:0000313|EMBL:CBH22792.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_12_scaffold_390_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9167..12916)
DNA (3750bp) protein (1250aa)
Transmembrane protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYL9_SALRD
transmembrane protein, putative
Transmembrane protein, putative {ECO:0000313|EMBL:ABC46378.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
Displaying 12 items

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