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sw_12_scaffold_436

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_436_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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475..1611
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKX6_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ67128.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sw_12_scaffold_436_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1627..1824
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DID7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34477.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_12_scaffold_436_3
unknown

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1873..2058
DNA (186bp) protein (62aa)

This feature has no annotations

sw_12_scaffold_436_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2117..3259
DNA (1143bp) protein (381aa)
CBS domain containing membrane protein n=3 Tax=Haloarcula RepID=G0HVZ7_HALHT
hypothetical protein
CBS domain-containing membrane protein {ECO:0000313|EMBL:EMA18038.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula a
sw_12_scaffold_436_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3281..3706)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=Q9HNX9_HALSA
UpsA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:CAP14385.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (stra
sw_12_scaffold_436_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3755..5557)
DNA (1803bp) protein (601aa)
ArNOG05179 family protein (DUF87-related AAA-type ATPase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS52_NATM8
arNOG05179 family protein (DUF87-related AAA-type ATPase)
ArNOG05179 family protein (DUF87-related AAA-type ATPase) {ECO:0000313|EMBL:CCQ37148.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;"
sw_12_scaffold_436_7

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comp(6158..7420)
DNA (1263bp) protein (421aa)
Sugar phosphate permease n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y6Q6_9ARCH
Sugar phosphate permease {ECO:0000313|EMBL:ESS06712.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
major facilitator superfamily protein
sw_12_scaffold_436_8

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7502..9265
DNA (1764bp) protein (588aa)
Uncharacterized protein involved in propionate catabolism n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYE8_9ARCH
Uncharacterized protein involved in propionate catabolism {ECO:0000313|EMBL:ESS07328.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
uncharacterized protein involved in propionate catabolism
sw_12_scaffold_436_9

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comp(9314..10627)
DNA (1314bp) protein (438aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGQ7_9ARCH
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ESS07329.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_436_10

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10894..11217
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWK1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07330.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_436_11

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comp(11231..12211)
DNA (981bp) protein (327aa)
ABC-type sugar transport system, permease component n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3V8_9ARCH
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ESS07331.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
sw_12_scaffold_436_12

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comp(12211..13158)
DNA (948bp) protein (316aa)
ABC-type sugar transport system, permease component n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y8E2_9ARCH
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ESS07332.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
ABC transporter integral membrane protein
sw_12_scaffold_436_13

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comp(13158..14327)
DNA (1170bp) protein (390aa)
ABC-type sugar transport system, ATPase component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYF1_9ARCH
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:ESS07333.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family
sw_12_scaffold_436_14
unknown

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comp(14349..14582)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_12_scaffold_436_15

Not on your lists

14677..15171
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWK6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07335.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_12_scaffold_436_16
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(15168..16226)
DNA (1059bp) protein (353aa)
3-isopropylmalate dehydrogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3H4_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ELY56162.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyt
isocitrate/isopropylmalate dehydrogenase
Displaying 16 items

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