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sw_12_scaffold_45

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_45_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..175)
DNA (174bp) protein (58aa)
Uncharacterized proteins, LmbE homolog n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7P3_SALRM
LmbE-like protein
Uncharacterized proteins, LmbE homolog {ECO:0000313|EMBL:CBH24048.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_12_scaffold_45_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(382..1074)
DNA (693bp) protein (231aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:CBH24047.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=7616
Leucine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7P2_SALRM
Suspect SCG annotation. See neighboring gene [sw_12_scaffold_45_3].
leuS; leucyl-tRNA synthetase
sw_12_scaffold_45_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1071..2969)
DNA (1899bp) protein (633aa)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=24658851 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
leuS; leucyl-tRNA synthetase
sw_12_scaffold_45_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3326..3757
DNA (432bp) protein (144aa)
CoA-binding domain-containing protein
CoA-binding domain-containing protein id=24658850 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
CoA binding domain protein {ECO:0000313|EMBL:ABC45403.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_12_scaffold_45_5
unknown

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comp(3877..4107)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_12_scaffold_45_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4610..5026
DNA (417bp) protein (139aa)
Rrf2 family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B636AC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBH23845.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_12_scaffold_45_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5431..6600
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44432.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_45_8
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7162..10404
DNA (3243bp) protein (1081aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZR5_CYCMS
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEL25729.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyc
sw_12_scaffold_45_9
unknown

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10506..10613
DNA (108bp) protein (36aa)

This feature has no annotations

sw_12_scaffold_45_10
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10629..12254
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037739B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25730.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
sw_12_scaffold_45_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12330..13274
DNA (945bp) protein (315aa)
gluconolactonase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B57E37
SMP-30/gluconolaconase/LRE domain-containing protein Tax=RBG_16_Ignavibacteria_34_14_curated
SMP-30/gluconolaconase/LRE-like region-containing protein
sw_12_scaffold_45_12
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13419..13925
DNA (507bp) protein (169aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMD6_9BACT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EON75242.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacter
endoribonuclease L-PSP
sw_12_scaffold_45_13
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14032..15264
DNA (1233bp) protein (411aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
sw_12_scaffold_45_14
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15382..16563
DNA (1182bp) protein (394aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
sw_12_scaffold_45_15
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16772..18091
DNA (1320bp) protein (440aa)
Dihydroorotase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANF2_MARSH
dihydroorotase
Dihydroorotase {ECO:0000313|EMBL:EAR02524.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170
sw_12_scaffold_45_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18363..21785
DNA (3423bp) protein (1141aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH0_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49411.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
sw_12_scaffold_45_17
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21800..23557
DNA (1758bp) protein (586aa)
Cytochrome c class I n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZR3_CYCMS
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEL25727.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain
sw_12_scaffold_45_18
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23679..24239
DNA (561bp) protein (187aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZQ8_CYCMS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEL25722.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobact
sw_12_scaffold_45_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24276..24578
DNA (303bp) protein (101aa)
RNA polymerase subunit sigma-32 n=1 Tax=Salisaeta longa RepID=UPI0003B32777
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48384.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_12_scaffold_45_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24638..26326
DNA (1689bp) protein (563aa)
sodium:solute symporter n=1 Tax=Salisaeta longa RepID=UPI0003B64615
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACY48383.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_12_scaffold_45_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26594..27856
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJ95_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73473.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_12_scaffold_45_22

Not on your lists

27949..29517
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6M1_ISOPI
Marine sediment metagenome DNA, contig: S06H3_L02471 {ECO:0000313|EMBL:GAI17249.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
sw_12_scaffold_45_23
unknown

Not on your lists

comp(29346..29831)
DNA (486bp) protein (162aa)

This feature has no annotations

sw_12_scaffold_45_24
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29983..31731)
DNA (1749bp) protein (583aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-17 {ECO:0000313|EMBL:CAZ97290.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ97290.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zob
Sulfatase, family S1-17 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L7B6_ZOBGA
sw_12_scaffold_45_25
unknown

Not on your lists

comp(32374..32655)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 25 items

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