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sw_12_scaffold_549

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_549_trna_1
unknown

Not on your lists

158..233
DNA (76bp)
transferRNA
sw_12_scaffold_549_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

356..643
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSB1_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37243.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_549_2
unknown

Not on your lists

756..977
DNA (222bp) protein (74aa)

This feature has no annotations

sw_12_scaffold_549_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1067..1282
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53201.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Protein of unknown function (DUF2892)
sw_12_scaffold_549_4
unknown

Not on your lists

1365..1553
DNA (189bp) protein (63aa)

This feature has no annotations

sw_12_scaffold_549_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1764..2453)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3R3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13404.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_549_6
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2590..3987)
DNA (1398bp) protein (466aa)
Beta-lactamase n=2 Tax=Natronorubrum tibetense RepID=L9VWZ8_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY41522.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
beta-lactamase
sw_12_scaffold_549_7
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4201..4602
DNA (402bp) protein (134aa)
30S ribosomal protein S6e n=2 Tax=Halobacterium salinarum RepID=RS6E_HALS3
rps6e; 30S ribosomal protein S6
30S ribosomal protein S6e {ECO:0000255|HAMAP-Rule:MF_00512}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salina
sw_12_scaffold_549_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4683..5123
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEY4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43239.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_549_9
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5277..5900)
DNA (624bp) protein (208aa)
PadR family transcriptional regulator n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BM92_9EURY
PadR family transcriptional regulator {ECO:0000313|EMBL:ELZ11980.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus
putative transcriptional regulator
sw_12_scaffold_549_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6454..6927
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43240.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_549_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6976..8085)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50044.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
recJ4; RecJ-like exonuclease
sw_12_scaffold_549_12
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8179..8631)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W982_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46020.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
sw_12_scaffold_549_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8753..9403)
DNA (651bp) protein (217aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N649_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA53356.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
alpha/beta hydrolase fold protein
sw_12_scaffold_549_14
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9767..10831
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VGK1_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ELY36176.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubr
alcohol dehydrogenase GroES domain protein
sw_12_scaffold_549_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11220..11870
DNA (651bp) protein (217aa)
Halocyanin-like protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KZF0_9EURY
hcp6; halocyanin-like protein
Halocyanin domain protein {ECO:0000313|EMBL:ACV48545.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
sw_12_scaffold_549_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11929..12270)
DNA (342bp) protein (114aa)
Acyl-CoA synthetase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CSN0_9EURY
acyl-CoA synthetase
Acyl-CoA synthetase {ECO:0000313|EMBL:ELZ26216.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
sw_12_scaffold_549_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12344..12919
DNA (576bp) protein (192aa)
TATA-box-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J609_HALJB
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
sw_12_scaffold_549_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13119..13595
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30033.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
endoribonuclease L-PSP
sw_12_scaffold_549_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13630..14001
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7S8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53608.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_549_20
unknown

Not on your lists

comp(14093..14218)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_12_scaffold_549_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14303..15148)
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX64_9EURY
ATP phosphoribosyltransferase
sw_12_scaffold_549_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15337..15534)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48403.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_12_scaffold_549_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15657..16364)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42762.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_549_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17226..18599
DNA (1374bp) protein (458aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN27_9EURY
amidohydrolase
Displaying 25 items

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